RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeastyeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOA1YKL213C HIR1P32479 840 aa5.33□□□□□ -1.56
DOA1YKL213C TFC3P34111 1160 aa5.33□□□□□ -1.56
DOA1YKL213C YEL076CP39971 216 aa5.33□□□□□ -1.56
DOA1YKL213C HMF1P40037 129 aaKnown RBP5.33□□□□□ -1.56
DOA1YKL213C RAD26P40352 1085 aa5.33□□□□□ -1.56
DOA1YKL213C TFG1P41895 735 aaPredicted RBP5.33□□□□□ -1.56
DOA1YKL213C ZPR1P53303 486 aaKnown RBP5.33□□□□□ -1.56
DOA1YKL213C DAK1P54838 584 aaKnown RBP5.33□□□□□ -1.56
DOA1YKL213C TIM11P81449 96 aaPredicted RBP5.33□□□□□ -1.56
DOA1YKL213C VMS1Q04311 632 aaKnown RBP5.33□□□□□ -1.56
DOA1YKL213C RRP9Q06506 573 aaKnown RBP5.33□□□□□ -1.56
DOA1YKL213C NDL1Q06568 189 aa5.33□□□□□ -1.56
DOA1YKL213C TRS33Q99394 268 aa5.33□□□□□ -1.56
DOA1YKL213C PRP22P24384 1145 aaKnown RBP5.32□□□□□ -1.56
DOA1YKL213C CDC15P27636 974 aa5.32□□□□□ -1.56
DOA1YKL213C GCD6P32501 712 aaKnown RBP5.32□□□□□ -1.56
DOA1YKL213C GPT2P36148 743 aa5.32□□□□□ -1.56
DOA1YKL213C VTC2P43585 828 aa5.32□□□□□ -1.56
DOA1YKL213C PSR2Q07949 397 aa5.32□□□□□ -1.56
DOA1YKL213C YDR524C-BQ3E6R4 66 aa5.32□□□□□ -1.56
DOA1YKL213C VPS13Q07878 3144 aa5.32□□□□□ -1.56
DOA1YKL213C SRD1P09007 221 aa5.32□□□□□ -1.56
DOA1YKL213C HEM1P09950 548 aaPredicted RBP5.32□□□□□ -1.56
DOA1YKL213C SSB1P11484 613 aaKnown RBP5.32□□□□□ -1.56
DOA1YKL213C KAR3P17119 729 aa5.32□□□□□ -1.56
DOA1YKL213C ISY1P21374 235 aaPredicted RBP5.32□□□□□ -1.56
DOA1YKL213C TIM23P32897 222 aa5.32□□□□□ -1.56
DOA1YKL213C TVP38P36164 337 aa5.32□□□□□ -1.56
DOA1YKL213C SIP3P38717 1229 aa5.32□□□□□ -1.56
DOA1YKL213C SSB2P40150 613 aaKnown RBP5.32□□□□□ -1.56
DOA1YKL213C NUP82P40368 713 aa5.32□□□□□ -1.56
DOA1YKL213C RPS7BP48164 190 aaKnown RBP5.32□□□□□ -1.56
DOA1YKL213C OCA1P50946 238 aaPredicted RBP5.32□□□□□ -1.56
DOA1YKL213C SVF1Q05515 481 aa5.32□□□□□ -1.56
DOA1YKL213C RTP1Q12751 981 aa5.32□□□□□ -1.56
DOA1YKL213C SAC6P32599 642 aaKnown RBP5.31□□□□□ -1.56
DOA1YKL213C PIH1P38768 344 aa5.31□□□□□ -1.56
DOA1YKL213C FIS1P40515 155 aa5.31□□□□□ -1.56
DOA1YKL213C HST2P53686 357 aa5.31□□□□□ -1.56
DOA1YKL213C AHC1Q12433 566 aa5.31□□□□□ -1.56
DOA1YKL213C BRR1Q99177 341 aaPredicted RBP5.31□□□□□ -1.56
DOA1YKL213C PFK1P16861 987 aaKnown RBP5.3□□□□□ -1.56
DOA1YKL213C RAM2P29703 316 aa5.3□□□□□ -1.56
DOA1YKL213C PSO2P30620 661 aa5.3□□□□□ -1.56
DOA1YKL213C FLR1P38124 548 aa5.3□□□□□ -1.56
DOA1YKL213C RRM3P38766 723 aa5.3□□□□□ -1.56
DOA1YKL213C LAM1P38851 1228 aa5.3□□□□□ -1.56
DOA1YKL213C YTA6P40328 754 aa5.3□□□□□ -1.56
DOA1YKL213C ULP2P40537 1034 aaPredicted RBP5.3□□□□□ -1.56
DOA1YKL213C GUP1P53154 560 aa5.3□□□□□ -1.56
DOA1YKL213C CLP1Q08685 445 aaPredicted RBP5.3□□□□□ -1.56
DOA1YKL213C YLL058WQ12198 575 aa5.3□□□□□ -1.56
DOA1YKL213C LDB19Q12502 818 aa5.3□□□□□ -1.56
DOA1YKL213C MAS2P11914 482 aa5.3□□□□□ -1.56
DOA1YKL213C CDC48P25694 835 aaKnown RBP5.3□□□□□ -1.56
DOA1YKL213C KNS1P32350 737 aaPredicted RBP5.3□□□□□ -1.56
DOA1YKL213C GRS1P38088 690 aaKnown RBP5.3□□□□□ -1.56
DOA1YKL213C RKM3P38222 552 aa5.3□□□□□ -1.56
DOA1YKL213C MSC7P38694 644 aa5.3□□□□□ -1.56
DOA1YKL213C FYV10P40492 516 aa5.3□□□□□ -1.56
DOA1YKL213C NNF1P47149 201 aa5.3□□□□□ -1.56
DOA1YKL213C MDR1P53258 950 aa5.3□□□□□ -1.56
DOA1YKL213C BTN2P53286 410 aa5.3□□□□□ -1.56
DOA1YKL213C DSL1P53847 754 aa5.3□□□□□ -1.56
DOA1YKL213C GSY2P27472 705 aa5.29□□□□□ -1.56
DOA1YKL213C NIP100P33420 868 aa5.29□□□□□ -1.56
DOA1YKL213C PPS1P38148 807 aa5.29□□□□□ -1.56
DOA1YKL213C YEL025CP39991 1188 aa5.29□□□□□ -1.56
DOA1YKL213C RPN3P40016 523 aaKnown RBP5.29□□□□□ -1.56
DOA1YKL213C RPL17BP46990 184 aaKnown RBP5.29□□□□□ -1.56
DOA1YKL213C SEC5P89102 971 aa5.29□□□□□ -1.56
DOA1YKL213C VTI1Q04338 217 aa5.29□□□□□ -1.56
DOA1YKL213C GPI13Q07830 1017 aa5.29□□□□□ -1.56
DOA1YKL213C YPR117WQ06116 2489 aa5.29□□□□□ -1.56
DOA1YKL213C TCP1P12612 559 aaKnown RBP5.29□□□□□ -1.56
DOA1YKL213C KEX2P13134 814 aa5.29□□□□□ -1.56
DOA1YKL213C KIN82P25341 720 aa5.29□□□□□ -1.56
DOA1YKL213C HEM3P28789 327 aa5.29□□□□□ -1.56
DOA1YKL213C RNH70P53331 553 aa5.29□□□□□ -1.56
DOA1YKL213C SMC5Q08204 1093 aa5.29□□□□□ -1.56
DOA1YKL213C AFT2Q08957 416 aa5.29□□□□□ -1.56
DOA1YKL213C SNA3P14359 133 aa5.28□□□□□ -1.56
DOA1YKL213C ATE1P16639 503 aa5.28□□□□□ -1.56
DOA1YKL213C RME1P32338 300 aaKnown RBP5.28□□□□□ -1.56
DOA1YKL213C ZUO1P32527 433 aaKnown RBP5.28□□□□□ -1.56
DOA1YKL213C PGM2P37012 569 aaKnown RBP5.28□□□□□ -1.56
DOA1YKL213C RSC1P53236 928 aa5.28□□□□□ -1.56
DOA1YKL213C NCS2P53923 493 aaPredicted RBP5.28□□□□□ -1.56
DOA1YKL213C MSC2Q03455 724 aa5.28□□□□□ -1.56
DOA1YKL213C YDL057WQ07379 328 aa5.28□□□□□ -1.56
DOA1YKL213C TLG2Q08144 397 aa5.28□□□□□ -1.56
DOA1YKL213C MDM38Q08179 573 aa5.28□□□□□ -1.56
DOA1YKL213C HMI1Q12039 706 aa5.28□□□□□ -1.56
DOA1YKL213C NCR1Q12200 1170 aa5.28□□□□□ -1.56
DOA1YKL213C APN1P22936 367 aa5.27□□□□□ -1.57
DOA1YKL213C POT1P27796 417 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
DOA1YKL213C IRE1P32361 1115 aa5.27□□□□□ -1.57
DOA1YKL213C DUR3P33413 735 aa5.27□□□□□ -1.57
DOA1YKL213C COY1P34237 679 aa5.27□□□□□ -1.57
DOA1YKL213C ATG19P35193 415 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms