RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B YHR219WP38900 624 aa0.9□□□□□ -2.27
YNL054W-BYNL054W-B RPS26AP39938 119 aaKnown RBP0.9□□□□□ -2.27
YNL054W-BYNL054W-B RPS26BP39939 119 aaKnown RBP0.9□□□□□ -2.27
YNL054W-BYNL054W-B SUB2Q07478 446 aaKnown RBP0.9□□□□□ -2.27
YNL054W-BYNL054W-B CHC1P22137 1653 aaKnown RBP0.9□□□□□ -2.27
YNL054W-BYNL054W-B LEU3P08638 886 aa0.9□□□□□ -2.27
YNL054W-BYNL054W-B CDC3P32457 520 aaKnown RBP0.9□□□□□ -2.27
YNL054W-BYNL054W-B KOG1P38873 1557 aa0.9□□□□□ -2.27
YNL054W-BYNL054W-B HSV2P50079 448 aaPredicted RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B STP1Q00947 519 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B MAP1Q01662 387 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
YNL054W-BYNL054W-B SVF1Q05515 481 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B THI7Q05998 598 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B SPO21Q12411 609 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B GCN2P15442 1659 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B BNI1P41832 1953 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B SSA1P10591 642 aaKnown RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B CAF20P12962 161 aaKnown RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B PRP16P15938 1071 aaPredicted RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B PPH3P32345 308 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B IPL1P38991 367 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B PLB1P39105 664 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B XKS1P42826 600 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B VTS1Q08831 523 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
YNL054W-BYNL054W-B ALG7P07286 448 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B PEX2P32800 271 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B CBR1P38626 284 aaKnown RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B GCV2P49095 1034 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B GND2P53319 492 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B SWM1Q12379 170 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B ATG11Q12527 1178 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B PDR5P33302 1511 aaKnown RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B MTH1P35198 433 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B ADD66P36040 267 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B YBP1P38315 674 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B TDP1P38319 544 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B RTT107P38850 1070 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B REV7P38927 245 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B AMA1P50082 593 aa0.89□□□□□ -2.27
YNL054W-BYNL054W-B INP54Q08227 384 aaKnown RBP0.89□□□□□ -2.27
YNL054W-BYNL054W-B PRP9P19736 530 aaKnown RBP0.88□□□□□ -2.27
YNL054W-BYNL054W-B BOL3P39724 118 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B YJL045WP47052 634 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B YAP6Q03935 383 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B PTC5Q12511 572 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B ECM5Q03214 1411 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B CDC25P04821 1589 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B TY1B-NL2Q99337 1749 aaKnown RBP0.88□□□□□ -2.27
YNL054W-BYNL054W-B MEP2P41948 499 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B YAF9P53930 226 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B EMG1Q06287 252 aaKnown RBP0.88□□□□□ -2.27
YNL054W-BYNL054W-B YRM1Q12340 786 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B REV3P14284 1504 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B PEX6P33760 1030 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B TFA2P36145 328 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B YBR197CP38306 217 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B RIX1P38883 763 aaPredicted RBP0.88□□□□□ -2.27
YNL054W-BYNL054W-B PCI8P40512 444 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B POL32P47110 350 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B JSN1P47135 1091 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27not detected
YNL054W-BYNL054W-B SRP1Q02821 542 aaKnown RBP0.88□□□□□ -2.27
YNL054W-BYNL054W-B ARO10Q06408 635 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B PRP5P21372 849 aaPredicted RBP0.88□□□□□ -2.27
YNL054W-BYNL054W-B APD1P38281 316 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B MND2P40577 368 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B NPL3Q01560 414 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27not detected
YNL054W-BYNL054W-B IRA1P18963 3092 aa0.88□□□□□ -2.27
YNL054W-BYNL054W-B PGK1P00560 416 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B RDH54P38086 958 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B JHD1P40034 492 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B MRK1P50873 501 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B NPR1P22211 790 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B MRPL9P31334 269 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B STB4P50104 949 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B DUS4Q06063 367 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B EST2Q06163 884 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B NOC3Q07896 663 aaPredicted RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B HMI1Q12039 706 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B HAP1P0CE41 1502 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B TY3B-GQ99315 1547 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B NAP1P25293 417 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B VAC8P39968 578 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B MET12P46151 657 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B NAN1Q02931 896 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B HFD1Q04458 532 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B MRI1Q06489 411 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B CSF1Q12150 2958 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B RKR1Q04781 1562 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B SAM35P14693 329 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B SDS3P40505 327 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B EXG2P52911 562 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B SCW10Q04951 389 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B SPT6P23615 1451 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B YCF1P39109 1515 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B TRP4P07285 380 aaPredicted RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B HSL7P38274 827 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B YLR225CQ05948 407 aaKnown RBP0.87□□□□□ -2.27
YNL054W-BYNL054W-B YLL058WQ12198 575 aa0.87□□□□□ -2.27
YNL054W-BYNL054W-B YPK9Q12697 1472 aa0.86□□□□□ -2.27
YNL054W-BYNL054W-B SSN2P38931 1420 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms