RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W LYS5P50113 272 aa5.84□□□□□ -1.47
BUD8YLR353W TAF8Q03750 510 aa5.84□□□□□ -1.47
BUD8YLR353W RBA50Q04418 439 aa5.84□□□□□ -1.47
BUD8YLR353W PMD1P32634 1753 aa5.84□□□□□ -1.48
BUD8YLR353W PRP9P19736 530 aaKnown RBP5.83□□□□□ -1.48
BUD8YLR353W YKL107WP34251 309 aa5.83□□□□□ -1.48
BUD8YLR353W MSH4P40965 878 aaPredicted RBP5.83□□□□□ -1.48
BUD8YLR353W RRT6P53117 311 aaPredicted RBP5.83□□□□□ -1.48
BUD8YLR353W ADE12P80210 433 aaKnown RBP5.83□□□□□ -1.48
BUD8YLR353W HUL4P40985 892 aa5.83□□□□□ -1.48
BUD8YLR353W MEC3Q02574 474 aa5.83□□□□□ -1.48
BUD8YLR353W AOS1Q06624 347 aa5.83□□□□□ -1.48
BUD8YLR353W SYT1Q06836 1226 aa5.83□□□□□ -1.48
BUD8YLR353W YPL066WQ12194 479 aa5.83□□□□□ -1.48
BUD8YLR353W GRX4P32642 244 aa5.82□□□□□ -1.48
BUD8YLR353W UTP20P35194 2493 aaKnown RBP5.82□□□□□ -1.48
BUD8YLR353W PNT1P38969 423 aa5.82□□□□□ -1.48
BUD8YLR353W MPH1P40562 993 aa5.82□□□□□ -1.48
BUD8YLR353W YGL176CP46945 554 aa5.82□□□□□ -1.48
BUD8YLR353W GCV1P48015 400 aa5.82□□□□□ -1.48
BUD8YLR353W VPS62P53285 467 aa5.82□□□□□ -1.48
BUD8YLR353W UBX5Q06682 500 aa5.82□□□□□ -1.48
BUD8YLR353W PUF4P25339 888 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
BUD8YLR353W CEM1P39525 442 aa5.81□□□□□ -1.48
BUD8YLR353W ALR2P43553 858 aa5.81□□□□□ -1.48
BUD8YLR353W HNT2P49775 206 aa5.81□□□□□ -1.48
BUD8YLR353W SOK2P53438 785 aaPredicted RBP5.81□□□□□ -1.48
BUD8YLR353W ERO1Q03103 563 aa5.81□□□□□ -1.48
BUD8YLR353W SPO71Q03868 1245 aa5.81□□□□□ -1.48
BUD8YLR353W LCB5Q06147 687 aaKnown RBP5.81□□□□□ -1.48
BUD8YLR353W MSH2P25847 964 aa5.81□□□□□ -1.48
BUD8YLR353W PSF2P40359 213 aa5.81□□□□□ -1.48
BUD8YLR353W RTA1P53047 317 aa5.81□□□□□ -1.48
BUD8YLR353W ZDS2P54786 942 aa5.81□□□□□ -1.48
BUD8YLR353W ECM30Q06673 1274 aa5.81□□□□□ -1.48
BUD8YLR353W NOP14Q99207 810 aaKnown RBP5.81□□□□□ -1.48
BUD8YLR353W SSB1P11484 613 aaKnown RBP5.8□□□□□ -1.48
BUD8YLR353W TOM20P35180 183 aa5.8□□□□□ -1.48
BUD8YLR353W MCM7P38132 845 aa5.8□□□□□ -1.48
BUD8YLR353W ATG14P38270 344 aa5.8□□□□□ -1.48
BUD8YLR353W MBP1P39678 833 aa5.8□□□□□ -1.48
BUD8YLR353W SSB2P40150 613 aaKnown RBP5.8□□□□□ -1.48
BUD8YLR353W YFL040WP43562 540 aa5.8□□□□□ -1.48
BUD8YLR353W SRC1Q03707 834 aa5.8□□□□□ -1.48
BUD8YLR353W CTI6Q08923 506 aa5.8□□□□□ -1.48
BUD8YLR353W SLP1Q12232 587 aa5.8□□□□□ -1.48
BUD8YLR353W ALG3P38179 458 aa5.79□□□□□ -1.48
BUD8YLR353W RGD1P38339 666 aa5.79□□□□□ -1.48
BUD8YLR353W PAN5P38787 379 aa5.79□□□□□ -1.48
BUD8YLR353W GIP2P40036 548 aa5.79□□□□□ -1.48
BUD8YLR353W VID30P53076 958 aa5.79□□□□□ -1.48
BUD8YLR353W YDL124WQ07551 312 aaKnown RBP5.79□□□□□ -1.48
BUD8YLR353W PRP8P33334 2413 aaKnown RBP5.79□□□□□ -1.48
BUD8YLR353W RPL40AP0CH08 128 aaKnown RBP5.78□□□□□ -1.48
BUD8YLR353W RPL40BP0CH09 128 aaKnown RBP5.78□□□□□ -1.48
BUD8YLR353W BET3P36149 193 aa5.78□□□□□ -1.48
BUD8YLR353W REI1P38344 393 aaPredicted RBP5.78□□□□□ -1.48
BUD8YLR353W UBP12P39538 1254 aa5.78□□□□□ -1.48
BUD8YLR353W POL5P39985 1022 aaKnown RBP5.78□□□□□ -1.48
BUD8YLR353W RCM1P53972 490 aa5.78□□□□□ -1.48
BUD8YLR353W SRM1P21827 482 aa5.78□□□□□ -1.48
BUD8YLR353W MET22P32179 357 aa5.78□□□□□ -1.48
BUD8YLR353W SIP5P40210 489 aaKnown RBP5.78□□□□□ -1.48
BUD8YLR353W YGR117CP53270 476 aa5.78□□□□□ -1.48
BUD8YLR353W DNM1P54861 757 aa5.78□□□□□ -1.48
BUD8YLR353W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
BUD8YLR353W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
BUD8YLR353W YDR444WQ04093 687 aa5.78□□□□□ -1.48
BUD8YLR353W GIS4Q04233 774 aa5.78□□□□□ -1.48
BUD8YLR353W NTG2Q08214 380 aa5.78□□□□□ -1.48
BUD8YLR353W GNT1Q12096 491 aa5.78□□□□□ -1.48
BUD8YLR353W PDC5P16467 563 aaKnown RBP5.77□□□□□ -1.49
BUD8YLR353W MLS1P30952 554 aa5.77□□□□□ -1.49
BUD8YLR353W KNS1P32350 737 aaPredicted RBP5.77□□□□□ -1.49
BUD8YLR353W SPO74P45819 413 aa5.77□□□□□ -1.49
BUD8YLR353W YNR063WP53749 607 aa5.77□□□□□ -1.49
BUD8YLR353W LAP2Q10740 671 aa5.77□□□□□ -1.49
BUD8YLR353W YLL054CQ12244 843 aa5.77□□□□□ -1.49
BUD8YLR353W GRX6Q12438 231 aa5.77□□□□□ -1.49
BUD8YLR353W PTC5Q12511 572 aa5.77□□□□□ -1.49
BUD8YLR353W NAR1P23503 491 aaKnown RBP5.76□□□□□ -1.49
BUD8YLR353W HBS1P32769 611 aaKnown RBP5.76□□□□□ -1.49
BUD8YLR353W SCT1P32784 759 aa5.76□□□□□ -1.49
BUD8YLR353W ACO2P39533 789 aa5.76□□□□□ -1.49
BUD8YLR353W YAR028WP39548 234 aa5.76□□□□□ -1.49
BUD8YLR353W YIR007WP40566 764 aa5.76□□□□□ -1.49
BUD8YLR353W ADE16P54113 591 aaKnown RBP5.76□□□□□ -1.49
BUD8YLR353W TRM44Q02648 567 aaKnown RBP5.76□□□□□ -1.49
BUD8YLR353W UGO1Q03327 502 aa5.76□□□□□ -1.49
BUD8YLR353W RPO41P13433 1351 aaKnown RBP5.76□□□□□ -1.49
BUD8YLR353W CRP1P38845 465 aaKnown RBP5.76□□□□□ -1.49
BUD8YLR353W CCC2P38995 1004 aa5.76□□□□□ -1.49
BUD8YLR353W TED1P40533 473 aa5.76□□□□□ -1.49
BUD8YLR353W VPS53P47061 822 aa5.76□□□□□ -1.49
BUD8YLR353W DAP1Q12091 152 aa5.76□□□□□ -1.49
BUD8YLR353W HBN1Q96VH4 193 aa5.76□□□□□ -1.49
BUD8YLR353W GPM1P00950 247 aaKnown RBP5.75□□□□□ -1.49
BUD8YLR353W GDH3P39708 457 aa5.75□□□□□ -1.49
BUD8YLR353W HSV2P50079 448 aaPredicted RBP5.75□□□□□ -1.49
BUD8YLR353W MAL11P53048 616 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms