RNA–Protein interactions for RNA: YHR214C-B

YHR214C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHR214C-B, Length 5,382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHR214C-BYHR214C-B SPO1P53541 631 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B SUB2Q07478 446 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B DIN7Q12086 430 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B RUD3Q12234 484 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B HAT1Q12341 374 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B GYP5Q12344 894 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B DBP10Q12389 995 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B RPO21P04050 1733 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B THS1P04801 734 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B PPH22P23595 377 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B VPS3P23643 1011 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B MSH2P25847 964 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B PCA1P38360 1216 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B PPX1P38698 397 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B RPN10P38886 268 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B BUD16P39988 312 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B ALA1P40825 983 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B GLG2P47011 380 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B CUE3P53137 624 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B CIA1Q05583 330 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B HRD3Q05787 833 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B YLH47Q06493 454 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B HMI1Q12039 706 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B ATE1P16639 503 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B ADH7P25377 361 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B CYM1P32898 989 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B COY1P34237 679 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B KTR4P38131 464 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B CST26P38226 397 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B SSZ1P38788 538 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B YTA12P40341 825 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B YRB1P41920 201 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B EMP47P43555 445 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B UBP15P50101 1230 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B YML6P51998 286 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B CWH41P53008 833 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B CUL3P53202 744 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B SKO1Q02100 647 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B RSC4Q02206 625 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B TOF2Q02208 771 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B NHP10Q03435 203 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B CST9Q06032 482 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B EMG1Q06287 252 aaKnown RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B YPQ2Q06328 317 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B YPR174CQ06616 221 aaPredicted RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B PRP11Q07350 266 aaPredicted RBP2.04□□□□□ -2.08
YHR214C-BYHR214C-B RKM4Q12504 494 aa2.04□□□□□ -2.08
YHR214C-BYHR214C-B MIS1P09440 975 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B TIF1P10081 395 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B NTH2P35172 780 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B NTR2P36118 322 aaPredicted RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B ARA1P38115 344 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B YBL086CP38177 466 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B GIP1P38229 639 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B YHL008CP38750 627 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B KTR5P53966 522 aaPredicted RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B MSC2Q03455 724 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B VTA1Q06263 330 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B AAD15Q08361 143 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B CTF3Q12748 733 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B MDM12Q92328 271 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B SEY1Q99287 776 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B NMT1P14743 455 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B CDC60P26637 1090 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B MCM2P29469 868 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B RPC82P32349 654 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B RTG2P32608 588 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B SLD2P34252 453 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B YKR023WP36119 530 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B ALG3P38179 458 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B YSW1P38280 609 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B SBE22P38814 852 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B SWM2P40342 146 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B CST6P40535 587 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B SET2P46995 733 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B SPC105P53148 917 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B PLP2Q12017 286 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B CIT1P00890 479 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B CPA2P03965 1118 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B SCP160P06105 1222 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
YHR214C-BYHR214C-B YKU70P32807 602 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B TRM2P33753 639 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B UBP14P38237 781 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B SFB3P38810 929 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B NUP60P39705 539 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B IRR1P40541 1150 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B SSY5P47002 699 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B YJL132WP47014 750 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B MAD3P47074 515 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B PRP31P49704 494 aaPredicted RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B YGR237CP50089 785 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B PRP42Q03776 544 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B SNU56Q03782 492 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B INP2Q03824 705 aa2.03□□□□□ -2.08
YHR214C-BYHR214C-B BMS1Q08965 1183 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B TSR3Q12094 313 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B NOP14Q99207 810 aaKnown RBP2.03□□□□□ -2.08
YHR214C-BYHR214C-B TY1B-JR2P47100 1755 aaKnown RBP2.03□□□□□ -2.09
YHR214C-BYHR214C-B TY1B-ER2Q03619 1755 aa2.03□□□□□ -2.09
YHR214C-BYHR214C-B TY1B-MR1Q04214 1755 aa2.03□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms