RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C SPP381P38282 291 aaPredicted RBP6.1□□□□□ -1.43
SFB3YHR098C TIF4631P39935 952 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C IES5P40060 125 aa6.1□□□□□ -1.43
SFB3YHR098C UFD2P54860 961 aa6.1□□□□□ -1.43
SFB3YHR098C PKH3Q03306 898 aaPredicted RBP6.1□□□□□ -1.43
SFB3YHR098C UTP5Q04177 643 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C POB3Q04636 552 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C SPR28Q04921 423 aa6.1□□□□□ -1.43
SFB3YHR098C YLR287CQ05881 355 aa6.1□□□□□ -1.43
SFB3YHR098C NHA1Q99271 985 aa6.1□□□□□ -1.43
SFB3YHR098C ADE3P07245 946 aaKnown RBP6.09□□□□□ -1.43
SFB3YHR098C BAS1P22035 811 aa6.09□□□□□ -1.43
SFB3YHR098C URA1P28272 314 aaPredicted RBP6.09□□□□□ -1.43
SFB3YHR098C SEG2P34250 1132 aa6.09□□□□□ -1.43
SFB3YHR098C LSC2P53312 427 aa6.09□□□□□ -1.43
SFB3YHR098C USA1Q03714 838 aa6.09□□□□□ -1.43
SFB3YHR098C MSH6Q03834 1242 aa6.09□□□□□ -1.43
SFB3YHR098C PLP1Q04004 230 aa6.09□□□□□ -1.43
SFB3YHR098C TSR2Q06672 205 aaKnown RBP6.09□□□□□ -1.43
SFB3YHR098C NOC3Q07896 663 aaPredicted RBP6.09□□□□□ -1.43
SFB3YHR098C SBP1P10080 294 aaKnown RBP6.09□□□□□ -1.43
SFB3YHR098C SPO11P23179 398 aa6.09□□□□□ -1.43
SFB3YHR098C RME1P32338 300 aaKnown RBP6.09□□□□□ -1.43
SFB3YHR098C TIF3P34167 436 aaKnown RBP6.09□□□□□ -1.43
SFB3YHR098C RTS1P38903 757 aa6.09□□□□□ -1.43
SFB3YHR098C YGR237CP50089 785 aa6.09□□□□□ -1.43
SFB3YHR098C FPK1P53739 893 aa6.09□□□□□ -1.43
SFB3YHR098C VTI1Q04338 217 aa6.09□□□□□ -1.43
SFB3YHR098C TY4B-HP0C2J7 1802 aa6.09□□□□□ -1.44
SFB3YHR098C TY4B-JP47024 1803 aa6.09□□□□□ -1.44
SFB3YHR098C UGA3P26370 528 aa6.08□□□□□ -1.44
SFB3YHR098C PEP3P27801 918 aa6.08□□□□□ -1.44
SFB3YHR098C VPS35P34110 944 aa6.08□□□□□ -1.44
SFB3YHR098C SQT1P35184 431 aa6.08□□□□□ -1.44
SFB3YHR098C RPA14P50106 137 aa6.08□□□□□ -1.44
SFB3YHR098C TEL2P53038 688 aa6.08□□□□□ -1.44
SFB3YHR098C MUB1Q03162 620 aa6.08□□□□□ -1.44
SFB3YHR098C YMR196WQ04336 1088 aa6.08□□□□□ -1.44
SFB3YHR098C YMR114CQ04471 368 aaKnown RBP6.08□□□□□ -1.44
SFB3YHR098C TAF10Q12030 206 aa6.08□□□□□ -1.44
SFB3YHR098C HIF1Q12373 385 aa6.08□□□□□ -1.44
SFB3YHR098C GFA1P14742 717 aaKnown RBP6.08□□□□□ -1.44
SFB3YHR098C HCA4P20448 770 aaKnown RBP6.08□□□□□ -1.44
SFB3YHR098C CBF2P32504 956 aa6.08□□□□□ -1.44
SFB3YHR098C RPN2P32565 945 aaKnown RBP6.08□□□□□ -1.44
SFB3YHR098C SEC6P32844 805 aa6.08□□□□□ -1.44
SFB3YHR098C YEL1P34225 687 aa6.08□□□□□ -1.44
SFB3YHR098C MIP6P38760 659 aaKnown RBP6.08□□□□□ -1.44
SFB3YHR098C MCM6P53091 1017 aaKnown RBP6.08□□□□□ -1.44
SFB3YHR098C UTP22P53254 1237 aaPredicted RBP6.08□□□□□ -1.44
SFB3YHR098C SPP382Q06411 708 aaPredicted RBP6.08□□□□□ -1.44
SFB3YHR098C PSR1Q07800 427 aa6.08□□□□□ -1.44
SFB3YHR098C LSO1Q3E827 93 aa6.08□□□□□ -1.44
SFB3YHR098C ESS1P22696 170 aa6.07□□□□□ -1.44
SFB3YHR098C YCR051WP25631 222 aa6.07□□□□□ -1.44
SFB3YHR098C PDC6P26263 563 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C PPG1P32838 368 aa6.07□□□□□ -1.44
SFB3YHR098C PET112P33893 541 aa6.07□□□□□ -1.44
SFB3YHR098C RPC37P36121 282 aa6.07□□□□□ -1.44
SFB3YHR098C MAD1P40957 749 aa6.07□□□□□ -1.44
SFB3YHR098C COG6P53959 839 aa6.07□□□□□ -1.44
SFB3YHR098C YKR005CQ02203 525 aa6.07□□□□□ -1.44
SFB3YHR098C EBS1Q03466 884 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C RPL22AP05749 121 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C APL1P27351 700 aa6.07□□□□□ -1.44
SFB3YHR098C MLS1P30952 554 aa6.07□□□□□ -1.44
SFB3YHR098C PYC2P32327 1180 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C GCG1P32656 232 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C YHR020WP38708 688 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C RPL34BP40525 121 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C YNL320WP42840 284 aa6.07□□□□□ -1.44
SFB3YHR098C HXT10P43581 546 aa6.07□□□□□ -1.44
SFB3YHR098C TAF1P46677 1066 aa6.07□□□□□ -1.44
SFB3YHR098C BRO1P48582 844 aa6.07□□□□□ -1.44
SFB3YHR098C DSL1P53847 754 aa6.07□□□□□ -1.44
SFB3YHR098C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
SFB3YHR098C RPT6Q01939 405 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C SXM1Q04175 944 aaKnown RBP6.07□□□□□ -1.44
SFB3YHR098C PWP1P21304 576 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C NIP1P32497 812 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C SSE1P32589 693 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C UGA2P38067 497 aa6.06□□□□□ -1.44
SFB3YHR098C TDA3P38758 523 aa6.06□□□□□ -1.44
SFB3YHR098C VFA1P40080 203 aa6.06□□□□□ -1.44
SFB3YHR098C CUE3P53137 624 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C MGR3Q04472 501 aa6.06□□□□□ -1.44
SFB3YHR098C GPN2Q08726 347 aaPredicted RBP6.06□□□□□ -1.44
SFB3YHR098C RSF2P46974 1380 aa6.06□□□□□ -1.44
SFB3YHR098C KTR2P33550 425 aa6.06□□□□□ -1.44
SFB3YHR098C TDA10P42938 290 aa6.06□□□□□ -1.44
SFB3YHR098C IES1P43579 692 aa6.06□□□□□ -1.44
SFB3YHR098C FMP30Q02883 468 aa6.06□□□□□ -1.44
SFB3YHR098C MRD1Q06106 887 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C NEW1Q08972 1196 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C SWI6P09959 803 aa6.06□□□□□ -1.44
SFB3YHR098C SIN4P32259 974 aa6.06□□□□□ -1.44
SFB3YHR098C RPC25P35718 212 aa6.06□□□□□ -1.44
SFB3YHR098C SYG1P40528 902 aa6.06□□□□□ -1.44
SFB3YHR098C PEX8P53248 589 aa6.06□□□□□ -1.44
SFB3YHR098C FAP1P53971 965 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms