RNA–Protein interactions for RNA: YGR087C

PDC6, Transcript of Minor isoform of pyruvate decarboxylase, yeastyeast

Gene PDC6, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC6YGR087C MRF1P30775 413 aaPredicted RBP8.72□□□□□ -1.01
PDC6YGR087C BCS1P32839 456 aa8.72□□□□□ -1.01
PDC6YGR087C YET1P35723 206 aa8.72□□□□□ -1.01
PDC6YGR087C GPT2P36148 743 aa8.72□□□□□ -1.01
PDC6YGR087C UBP13P38187 747 aa8.72□□□□□ -1.01
PDC6YGR087C HUL4P40985 892 aa8.72□□□□□ -1.01
PDC6YGR087C AIP1P46680 615 aaKnown RBP8.72□□□□□ -1.01
PDC6YGR087C ACF4P47129 309 aa8.72□□□□□ -1.01
PDC6YGR087C TPO2P53283 614 aa8.72□□□□□ -1.01
PDC6YGR087C YPL277CQ08989 487 aa8.72□□□□□ -1.01
PDC6YGR087C MAM3Q12296 706 aa8.72□□□□□ -1.01
PDC6YGR087C ECM29P38737 1868 aa8.72□□□□□ -1.01
PDC6YGR087C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
PDC6YGR087C TRK2P28584 889 aa8.72□□□□□ -1.01
PDC6YGR087C PAH1P32567 862 aa8.72□□□□□ -1.01
PDC6YGR087C SAP190P36123 1033 aa8.72□□□□□ -1.01
PDC6YGR087C CCM1P48237 864 aaPredicted RBP8.72□□□□□ -1.01
PDC6YGR087C YAP7Q08182 245 aa8.72□□□□□ -1.01
PDC6YGR087C PCK1P10963 549 aa8.71□□□□□ -1.02
PDC6YGR087C YEL1P34225 687 aa8.71□□□□□ -1.02
PDC6YGR087C RPC25P35718 212 aa8.71□□□□□ -1.02
PDC6YGR087C DAK1P54838 584 aaKnown RBP8.71□□□□□ -1.02
PDC6YGR087C ROD1Q02805 837 aa8.71□□□□□ -1.02
PDC6YGR087C COQ9Q05779 260 aa8.71□□□□□ -1.02
PDC6YGR087C ATG11Q12527 1178 aa8.71□□□□□ -1.02
PDC6YGR087C UBC1P21734 215 aaKnown RBP8.7□□□□□ -1.02
PDC6YGR087C SSD1P24276 1250 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
PDC6YGR087C KIN82P25341 720 aa8.7□□□□□ -1.02
PDC6YGR087C MCM2P29469 868 aa8.7□□□□□ -1.02
PDC6YGR087C SMY2P32909 740 aaKnown RBP8.7□□□□□ -1.02
PDC6YGR087C MSC2Q03455 724 aa8.7□□□□□ -1.02
PDC6YGR087C SPO75Q07798 868 aa8.7□□□□□ -1.02
PDC6YGR087C TCO89Q08921 799 aa8.7□□□□□ -1.02
PDC6YGR087C MED1Q12321 566 aa8.7□□□□□ -1.02
PDC6YGR087C NAM7P30771 971 aaKnown RBP8.69□□□□□ -1.02
PDC6YGR087C YSC83P32792 385 aa8.69□□□□□ -1.02
PDC6YGR087C COT1P32798 439 aa8.69□□□□□ -1.02
PDC6YGR087C VPS35P34110 944 aa8.69□□□□□ -1.02
PDC6YGR087C LEO1P38439 464 aa8.69□□□□□ -1.02
PDC6YGR087C CTM1P38818 585 aa8.69□□□□□ -1.02
PDC6YGR087C AFG3P39925 761 aa8.69□□□□□ -1.02
PDC6YGR087C FYV8P46949 817 aaKnown RBP8.69□□□□□ -1.02
PDC6YGR087C VPS62P53285 467 aa8.69□□□□□ -1.02
PDC6YGR087C RTT102P53330 157 aa8.69□□□□□ -1.02
PDC6YGR087C OSW2Q12202 724 aa8.69□□□□□ -1.02
PDC6YGR087C RTP1Q12751 981 aa8.69□□□□□ -1.02
PDC6YGR087C MAK16P10962 306 aaPredicted RBP8.69□□□□□ -1.02
PDC6YGR087C PHO8P11491 566 aa8.69□□□□□ -1.02
PDC6YGR087C SEC65P29478 273 aa8.69□□□□□ -1.02
PDC6YGR087C EFT1P32324 842 aaKnown RBP8.69□□□□□ -1.02
PDC6YGR087C KTR2P33550 425 aa8.69□□□□□ -1.02
PDC6YGR087C VID30P53076 958 aa8.69□□□□□ -1.02
PDC6YGR087C TAM41P53230 385 aa8.69□□□□□ -1.02
PDC6YGR087C RPS6AP0CX37 236 aaKnown RBP8.68□□□□□ -1.02
PDC6YGR087C RPS6BP0CX38 236 aaPredicted RBP8.68□□□□□ -1.02
PDC6YGR087C SNA3P14359 133 aa8.68□□□□□ -1.02
PDC6YGR087C MIP6P38760 659 aaKnown RBP8.68□□□□□ -1.02
PDC6YGR087C SAD1P43589 448 aa8.68□□□□□ -1.02
PDC6YGR087C CAF130P53280 1122 aaPredicted RBP8.68□□□□□ -1.02
PDC6YGR087C YDR090CQ03193 310 aa8.68□□□□□ -1.02
PDC6YGR087C VPS72Q03388 795 aa8.68□□□□□ -1.02
PDC6YGR087C GIR2Q03768 265 aaPredicted RBP8.68□□□□□ -1.02
PDC6YGR087C CUR1Q06469 252 aa8.68□□□□□ -1.02
PDC6YGR087C MLH2Q07980 695 aa8.68□□□□□ -1.02
PDC6YGR087C IES4Q08561 116 aa8.68□□□□□ -1.02
PDC6YGR087C CHS2P14180 963 aa8.67□□□□□ -1.02
PDC6YGR087C RME1P32338 300 aaKnown RBP8.67□□□□□ -1.02
PDC6YGR087C GUA1P38625 525 aaKnown RBP8.67□□□□□ -1.02
PDC6YGR087C UBP5P39944 805 aa8.67□□□□□ -1.02
PDC6YGR087C COG4Q06096 861 aa8.67□□□□□ -1.02
PDC6YGR087C HIF1Q12373 385 aa8.67□□□□□ -1.02
PDC6YGR087C SWI6P09959 803 aa8.66□□□□□ -1.02
PDC6YGR087C MPE1P35728 441 aaKnown RBP8.66□□□□□ -1.02
PDC6YGR087C MNN4P36044 1178 aa8.66□□□□□ -1.02
PDC6YGR087C SHM1P37292 490 aaPredicted RBP8.66□□□□□ -1.02
PDC6YGR087C LDH1P38139 375 aa8.66□□□□□ -1.02
PDC6YGR087C RTT107P38850 1070 aa8.66□□□□□ -1.02
PDC6YGR087C VPS75P53853 264 aa8.66□□□□□ -1.02
PDC6YGR087C YNL146WP53906 100 aa8.66□□□□□ -1.02
PDC6YGR087C VTC3Q02725 835 aa8.66□□□□□ -1.02
PDC6YGR087C CWC2Q12046 339 aaPredicted RBP8.66□□□□□ -1.02
PDC6YGR087C MDM20Q12387 796 aaKnown RBP8.66□□□□□ -1.02
PDC6YGR087C UIP5P36137 443 aa8.65□□□□□ -1.02
PDC6YGR087C PAM1P37304 830 aaKnown RBP8.65□□□□□ -1.02
PDC6YGR087C YML020WQ03722 664 aa8.65□□□□□ -1.02
PDC6YGR087C UTP14Q04500 899 aaKnown RBP8.65□□□□□ -1.02
PDC6YGR087C AFT1P22149 690 aa8.65□□□□□ -1.03
PDC6YGR087C MUD1P32605 298 aaKnown RBP8.65□□□□□ -1.03
PDC6YGR087C VID24P38263 362 aa8.65□□□□□ -1.03
PDC6YGR087C LCB2P40970 561 aa8.65□□□□□ -1.03
PDC6YGR087C TIM8P57744 87 aa8.65□□□□□ -1.03
PDC6YGR087C HFI1Q12060 488 aa8.65□□□□□ -1.03
PDC6YGR087C WHI2P12611 486 aa8.64□□□□□ -1.03
PDC6YGR087C APL1P27351 700 aa8.64□□□□□ -1.03
PDC6YGR087C MSS51P32335 436 aa8.64□□□□□ -1.03
PDC6YGR087C DUR3P33413 735 aa8.64□□□□□ -1.03
PDC6YGR087C INP51P40559 946 aaKnown RBP8.64□□□□□ -1.03
PDC6YGR087C AIM21P40563 679 aa8.64□□□□□ -1.03
PDC6YGR087C YLR287CQ05881 355 aa8.64□□□□□ -1.03
PDC6YGR087C SSB1P11484 613 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms