RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE29	YER038C	SAM35	P14693	329 aa		5.18	□□□□□ -1.58
KRE29	YER038C	SER1	P33330	395 aa	Known RBP	5.18	□□□□□ -1.58
KRE29	YER038C	AIM3	P38266	947 aa	Known RBP	5.18	□□□□□ -1.58
KRE29	YER038C	YGL082W	P53155	381 aa		5.18	□□□□□ -1.58
KRE29	YER038C	RIM8	P53179	542 aa		5.18	□□□□□ -1.58
KRE29	YER038C	ENV11	P53246	860 aa		5.18	□□□□□ -1.58
KRE29	YER038C	YNL050C	P53952	270 aa		5.18	□□□□□ -1.58
KRE29	YER038C	WHI5	Q12416	295 aa		5.18	□□□□□ -1.58
KRE29	YER038C	PMD1	P32634	1753 aa		5.18	□□□□□ -1.58
KRE29	YER038C	PFF1	P38244	976 aa		5.17	□□□□□ -1.58
KRE29	YER038C	GIP4	P39732	760 aa		5.17	□□□□□ -1.58
KRE29	YER038C	RTR1	P40084	226 aa	Predicted RBP	5.17	□□□□□ -1.58
KRE29	YER038C	SQS1	P53866	767 aa	Known RBP	5.17	□□□□□ -1.58
KRE29	YER038C	TOS4	Q06266	489 aa		5.17	□□□□□ -1.58
KRE29	YER038C	SSP2	Q08646	371 aa		5.17	□□□□□ -1.58
KRE29	YER038C	COQ4	O13525	335 aa		5.16	□□□□□ -1.58
KRE29	YER038C	PRD1	P25375	712 aa		5.16	□□□□□ -1.58
KRE29	YER038C	SMY1	P32364	656 aa	Known RBP	5.16	□□□□□ -1.58
KRE29	YER038C	YJL045W	P47052	634 aa		5.16	□□□□□ -1.58
KRE29	YER038C	SNU71	P53207	620 aa	Known RBP	5.16	□□□□□ -1.58
KRE29	YER038C	RAT1	Q02792	1006 aa	Known RBP	5.16	□□□□□ -1.58
KRE29	YER038C	ADI1	Q03677	179 aa		5.16	□□□□□ -1.58
KRE29	YER038C	NSE3	Q05541	303 aa		5.16	□□□□□ -1.58
KRE29	YER038C	SPS1	P08458	490 aa		5.16	□□□□□ -1.58
KRE29	YER038C	SEC20	P28791	383 aa		5.16	□□□□□ -1.58
KRE29	YER038C	EST2	Q06163	884 aa		5.16	□□□□□ -1.58
KRE29	YER038C	SOD2	P00447	233 aa		5.15	□□□□□ -1.59
KRE29	YER038C	YSC84	P32793	468 aa		5.15	□□□□□ -1.59
KRE29	YER038C	THI80	P35202	319 aa		5.15	□□□□□ -1.59
KRE29	YER038C	APL2	P36000	726 aa	Predicted RBP	5.15	□□□□□ -1.59
KRE29	YER038C	RDH54	P38086	958 aa		5.15	□□□□□ -1.59
KRE29	YER038C	CCZ1	P38273	704 aa		5.15	□□□□□ -1.59
KRE29	YER038C	ZDS1	P50111	915 aa	Known RBP	5.15	□□□□□ -1.59
KRE29	YER038C	ERO1	Q03103	563 aa		5.15	□□□□□ -1.59
KRE29	YER038C	BDF2	Q07442	638 aa		5.15	□□□□□ -1.59
KRE29	YER038C	RSB1	Q08417	382 aa		5.15	□□□□□ -1.59
KRE29	YER038C	YDL177C	Q12257	170 aa		5.15	□□□□□ -1.59
KRE29	YER038C	LYS2	P07702	1392 aa		5.14	□□□□□ -1.59
KRE29	YER038C	CAF20	P12962	161 aa	Known RBP	5.14	□□□□□ -1.59
KRE29	YER038C	RPT1	P33299	467 aa	Known RBP	5.14	□□□□□ -1.59
KRE29	YER038C	MAM1	P40065	302 aa		5.14	□□□□□ -1.59
KRE29	YER038C	YGL140C	P53120	1219 aa		5.14	□□□□□ -1.59
KRE29	YER038C	ZDS2	P54786	942 aa		5.14	□□□□□ -1.59
KRE29	YER038C	YPL109C	Q02981	657 aa		5.14	□□□□□ -1.59
KRE29	YER038C	THI22	Q06490	572 aa		5.14	□□□□□ -1.59
KRE29	YER038C	IRC3	Q06683	689 aa		5.14	□□□□□ -1.59
KRE29	YER038C	DIB1	Q06819	143 aa	Predicted RBP	5.14	□□□□□ -1.59
KRE29	YER038C	RSC58	Q07979	502 aa		5.14	□□□□□ -1.59
KRE29	YER038C	BMS1	Q08965	1183 aa	Known RBP	5.14	□□□□□ -1.59
KRE29	YER038C	TOP1	P04786	769 aa		5.13	□□□□□ -1.59
KRE29	YER038C	HXK1	P04806	485 aa	Known RBP	5.13	□□□□□ -1.59
KRE29	YER038C	RPS13	P05756	151 aa	Known RBP	5.13	□□□□□ -1.59
KRE29	YER038C	TOD6	P34219	525 aa		5.13	□□□□□ -1.59
KRE29	YER038C	FAA3	P39002	694 aa		5.13	□□□□□ -1.59
KRE29	YER038C	TAF1	P46677	1066 aa		5.13	□□□□□ -1.59
KRE29	YER038C	VPS64	Q03944	604 aa		5.13	□□□□□ -1.59
KRE29	YER038C	RTT109	Q07794	436 aa		5.13	□□□□□ -1.59
KRE29	YER038C	PTC5	Q12511	572 aa		5.13	□□□□□ -1.59
KRE29	YER038C	FAS2	P19097	1887 aa	Known RBP	5.13	□□□□□ -1.59
KRE29	YER038C	HEM13	P11353	328 aa	Known RBP	5.12	□□□□□ -1.59
KRE29	YER038C	PRE9	P23638	258 aa	Known RBP	5.12	□□□□□ -1.59
KRE29	YER038C	ICL1	P28240	557 aa	Predicted RBP	5.12	□□□□□ -1.59
KRE29	YER038C	SLD2	P34252	453 aa		5.12	□□□□□ -1.59
KRE29	YER038C	MPP10	P47083	593 aa	Known RBP	5.12	□□□□□ -1.59
KRE29	YER038C	GYP7	P48365	746 aa		5.12	□□□□□ -1.59
KRE29	YER038C	HOS3	Q02959	697 aa	Known RBP	5.12	□□□□□ -1.59
KRE29	YER038C	DED1	P06634	604 aa	Known RBP	5.11	□□□□□ -1.59
KRE29	YER038C	TAF13	P11747	167 aa		5.11	□□□□□ -1.59
KRE29	YER038C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
KRE29	YER038C	KIP1	P28742	1111 aa		5.11	□□□□□ -1.59
KRE29	YER038C	YKU70	P32807	602 aa		5.11	□□□□□ -1.59
KRE29	YER038C	FLR1	P38124	548 aa		5.11	□□□□□ -1.59
KRE29	YER038C	HNT2	P49775	206 aa		5.11	□□□□□ -1.59
KRE29	YER038C	TNA1	P53322	534 aa		5.11	□□□□□ -1.59
KRE29	YER038C	UBP16	Q02863	499 aa		5.11	□□□□□ -1.59
KRE29	YER038C	YOL057W	Q08225	711 aa		5.11	□□□□□ -1.59
KRE29	YER038C	YPL277C	Q08989	487 aa		5.11	□□□□□ -1.59
KRE29	YER038C	SSK22	P25390	1331 aa	Predicted RBP	5.1	□□□□□ -1.59
KRE29	YER038C	YLR358C	O13565	187 aa		5.1	□□□□□ -1.59
KRE29	YER038C	RPS9B	P05755	195 aa	Known RBP	5.1	□□□□□ -1.59
KRE29	YER038C	SEC23	P15303	768 aa	Known RBP	5.1	□□□□□ -1.59
KRE29	YER038C	SHC1	P39000	512 aa		5.1	□□□□□ -1.59
KRE29	YER038C	PIC2	P40035	300 aa		5.1	□□□□□ -1.59
KRE29	YER038C	MRPS18	P42847	217 aa		5.1	□□□□□ -1.59
KRE29	YER038C	SEN54	Q02825	467 aa	Predicted RBP	5.1	□□□□□ -1.59
KRE29	YER038C	SYF1	Q04048	859 aa	Predicted RBP	5.1	□□□□□ -1.59
KRE29	YER038C	TOM1	Q03280	3268 aa		5.09	□□□□□ -1.59
KRE29	YER038C	HKR1	P41809	1802 aa		5.09	□□□□□ -1.59
KRE29	YER038C	FRD1	P32614	470 aa	Known RBP	5.09	□□□□□ -1.59
KRE29	YER038C	CWC22	P53333	577 aa	Known RBP	5.09	□□□□□ -1.59
KRE29	YER038C	HEF3	P53978	1044 aa	Known RBP	5.09	□□□□□ -1.59
KRE29	YER038C	HDA2	Q06629	674 aa		5.09	□□□□□ -1.59
KRE29	YER038C	YDL144C	Q07589	356 aa		5.09	□□□□□ -1.59
KRE29	YER038C	MCD1	Q12158	566 aa		5.09	□□□□□ -1.59
KRE29	YER038C	GRX6	Q12438	231 aa		5.09	□□□□□ -1.59
KRE29	YER038C	THS1	P04801	734 aa	Known RBP	5.08	□□□□□ -1.6
KRE29	YER038C	SEC26	P41810	973 aa	Known RBP	5.08	□□□□□ -1.6
KRE29	YER038C	DNM1	P54861	757 aa		5.08	□□□□□ -1.6
KRE29	YER038C	PKH1	Q03407	766 aa		5.08	□□□□□ -1.6
KRE29	YER038C	SGD1	Q06132	899 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms