RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	COT1	P32798	439 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	RFT1	P38206	574 aa	Predicted RBP	6.43	□□□□□ -1.38
ATG12	YBR217W	POA1	P38218	177 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	MSC7	P38694	644 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	JHD1	P40034	492 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	RTT102	P53330	157 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	HST1	P53685	503 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	TOF1	P53840	1238 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	YDL057W	Q07379	328 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	IES4	Q08561	116 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	LSP1	Q12230	341 aa	Known RBP	6.43	□□□□□ -1.38
ATG12	YBR217W	HIF1	Q12373	385 aa		6.43	□□□□□ -1.38
ATG12	YBR217W	WHI2	P12611	486 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	TMT1	P32643	299 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	DJP1	P40564	432 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	VTC2	P43585	828 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	RSC8	P43609	557 aa	Known RBP	6.42	□□□□□ -1.38
ATG12	YBR217W	SPO74	P45819	413 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	JJJ3	P47138	172 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	YGR035C	P53222	116 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	YNL146W	P53906	100 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	YDR090C	Q03193	310 aa		6.42	□□□□□ -1.38
ATG12	YBR217W	DAL7	P21826	554 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	NAM7	P30771	971 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	HIR1	P32479	840 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	SLX5	P32828	619 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	VPS24	P36095	224 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	UBX7	P38349	436 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	CCT5	P40413	562 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	HYR1	P40581	163 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	GCV2	P49095	1034 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	SCY1	P53009	804 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	CAF130	P53280	1122 aa	Predicted RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	VMS1	Q04311	632 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	MAG2	Q06436	670 aa	Known RBP	6.41	□□□□□ -1.38
ATG12	YBR217W	TLG2	Q08144	397 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	HFI1	Q12060	488 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	OSW2	Q12202	724 aa		6.41	□□□□□ -1.38
ATG12	YBR217W	ADE4	P04046	510 aa	Known RBP	6.4	□□□□□ -1.38
ATG12	YBR217W	ADE2	P21264	571 aa	Known RBP	6.4	□□□□□ -1.38
ATG12	YBR217W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.4	□□□□□ -1.38	not detected
ATG12	YBR217W	SAC6	P32599	642 aa	Known RBP	6.4	□□□□□ -1.38
ATG12	YBR217W	YSC83	P32792	385 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	ELM1	P32801	640 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	YEL1	P34225	687 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	UBP13	P38187	747 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	VID24	P38263	362 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	CIR1	P42940	261 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	YFL034W	P43564	1073 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	TAM41	P53230	385 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	EMI2	Q04409	500 aa	Known RBP	6.4	□□□□□ -1.38
ATG12	YBR217W	YPL216W	Q08964	1102 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	YPL277C	Q08989	487 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	APC11	Q12157	165 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	ZPS1	Q12512	249 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	PCD1	Q12524	340 aa		6.4	□□□□□ -1.38
ATG12	YBR217W	DDP1	Q99321	188 aa	Known RBP	6.4	□□□□□ -1.38
ATG12	YBR217W	TOM70	P07213	617 aa	Known RBP	6.39	□□□□□ -1.39
ATG12	YBR217W	GPA1	P08539	472 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	RPC53	P25441	422 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	DPH2	P32461	534 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	MNN4	P36044	1178 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	SLX1	P38324	304 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	YER130C	P39959	443 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	OPT1	P40897	799 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	LAM5	P43560	674 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	NBP1	P52919	319 aa	Predicted RBP	6.39	□□□□□ -1.39
ATG12	YBR217W	MCM6	P53091	1017 aa	Known RBP	6.39	□□□□□ -1.39
ATG12	YBR217W	MNP1	P53163	194 aa	Predicted RBP	6.39	□□□□□ -1.39
ATG12	YBR217W	CUL3	P53202	744 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	ENV11	P53246	860 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	YNL134C	P53912	376 aa	Known RBP	6.39	□□□□□ -1.39
ATG12	YBR217W	SEC5	P89102	971 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	VTC3	Q02725	835 aa		6.39	□□□□□ -1.39
ATG12	YBR217W	DOT1	Q04089	582 aa	Known RBP	6.39	□□□□□ -1.39
ATG12	YBR217W	COX4	P04037	155 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	KEX1	P09620	729 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	PCK1	P10963	549 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	TRK2	P28584	889 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YKL091C	P33324	310 aa	Known RBP	6.38	□□□□□ -1.39
ATG12	YBR217W	VPS35	P34110	944 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YKT6	P36015	200 aa	Known RBP	6.38	□□□□□ -1.39
ATG12	YBR217W	YHL026C	P38740	315 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YAP1801	P38856	637 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	BIM1	P40013	344 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	FMP10	P40098	244 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YPT11	P48559	417 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	ORC5	P50874	479 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	TRS130	Q03660	1102 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YLR455W	Q06188	304 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	ECM7	Q06200	448 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	CUR1	Q06469	252 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YDR034W-B	Q6Q5X2	51 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	YLR422W	Q06409	1932 aa		6.38	□□□□□ -1.39
ATG12	YBR217W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.37	□□□□□ -1.39	not detected
ATG12	YBR217W	PHO8	P11491	566 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	GLN3	P18494	730 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	CSE2	P33308	149 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	MRX3	P38172	270 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	HUL4	P40985	892 aa		6.37	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 973.1 ms