RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W ENT3P47160 408 aa4.48□□□□□ -1.69
CHL1YPL008W LYS4P49367 693 aaPredicted RBP4.48□□□□□ -1.69
CHL1YPL008W HCR1Q05775 265 aaKnown RBP4.48□□□□□ -1.69
CHL1YPL008W ACK1Q07622 623 aaPredicted RBP4.48□□□□□ -1.69
CHL1YPL008W GET3Q12154 354 aaKnown RBP4.48□□□□□ -1.69
CHL1YPL008W SES1P07284 462 aaKnown RBP4.48□□□□□ -1.69
CHL1YPL008W SWI5P08153 709 aa4.48□□□□□ -1.69
CHL1YPL008W STI1P15705 589 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
CHL1YPL008W RGP1P16664 663 aa4.48□□□□□ -1.69
CHL1YPL008W MAK31P23059 88 aa4.48□□□□□ -1.69
CHL1YPL008W LCB1P25045 558 aaKnown RBP4.48□□□□□ -1.69
CHL1YPL008W YKL222CP35995 705 aa4.48□□□□□ -1.69
CHL1YPL008W RXT2P38255 430 aa4.48□□□□□ -1.69
CHL1YPL008W SPL2P38839 148 aa4.48□□□□□ -1.69
CHL1YPL008W MNN1P39106 762 aa4.48□□□□□ -1.69
CHL1YPL008W YIR042CP40586 236 aa4.48□□□□□ -1.69
CHL1YPL008W MSH4P40965 878 aaPredicted RBP4.48□□□□□ -1.69
CHL1YPL008W EPL1P43572 832 aa4.48□□□□□ -1.69
CHL1YPL008W CTH1P47976 325 aa4.48□□□□□ -1.69
CHL1YPL008W ERR1P0CX10 437 aa4.47□□□□□ -1.69
CHL1YPL008W ERR2P0CX11 437 aa4.47□□□□□ -1.69
CHL1YPL008W DUR3P33413 735 aa4.47□□□□□ -1.69
CHL1YPL008W YPQ2Q06328 317 aa4.47□□□□□ -1.69
CHL1YPL008W YCG1Q06680 1035 aa4.47□□□□□ -1.69
CHL1YPL008W RIX7Q07844 837 aaKnown RBP4.47□□□□□ -1.69
CHL1YPL008W CDC53Q12018 815 aaKnown RBP4.47□□□□□ -1.69
CHL1YPL008W ALG1P16661 449 aa4.47□□□□□ -1.69
CHL1YPL008W VAN1P23642 535 aa4.47□□□□□ -1.69
CHL1YPL008W PUF4P25339 888 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
CHL1YPL008W CDC11P32458 415 aa4.47□□□□□ -1.69
CHL1YPL008W OSW7P43611 510 aa4.47□□□□□ -1.69
CHL1YPL008W CDC55Q00362 526 aa4.47□□□□□ -1.69
CHL1YPL008W HOS3Q02959 697 aaKnown RBP4.47□□□□□ -1.69
CHL1YPL008W MYO5Q04439 1219 aaKnown RBP4.47□□□□□ -1.69
CHL1YPL008W GFD1Q04839 188 aaKnown RBP4.47□□□□□ -1.69
CHL1YPL008W DCS2Q12123 353 aa4.47□□□□□ -1.69
CHL1YPL008W SNF3P10870 884 aa4.46□□□□□ -1.7
CHL1YPL008W HCA4P20448 770 aaKnown RBP4.46□□□□□ -1.7
CHL1YPL008W ERT1P38140 529 aa4.46□□□□□ -1.7
CHL1YPL008W CCT3P39077 534 aaKnown RBP4.46□□□□□ -1.7
CHL1YPL008W NUP82P40368 713 aa4.46□□□□□ -1.7
CHL1YPL008W RPT6Q01939 405 aaKnown RBP4.46□□□□□ -1.7
CHL1YPL008W RSC4Q02206 625 aa4.46□□□□□ -1.7
CHL1YPL008W PRP42Q03776 544 aaKnown RBP4.46□□□□□ -1.7
CHL1YPL008W YDR341CQ05506 607 aaKnown RBP4.46□□□□□ -1.7
CHL1YPL008W PET111P08468 800 aa4.46□□□□□ -1.7
CHL1YPL008W SAS3P34218 831 aa4.46□□□□□ -1.7
CHL1YPL008W SAP190P36123 1033 aa4.46□□□□□ -1.7
CHL1YPL008W ADE17P38009 592 aaKnown RBP4.46□□□□□ -1.7
CHL1YPL008W YBL086CP38177 466 aa4.46□□□□□ -1.7
CHL1YPL008W PIC2P40035 300 aa4.46□□□□□ -1.7
CHL1YPL008W CEP3P40969 608 aa4.46□□□□□ -1.7
CHL1YPL008W GNP1P48813 663 aa4.46□□□□□ -1.7
CHL1YPL008W TBF1Q02457 562 aa4.46□□□□□ -1.7
CHL1YPL008W TIM50Q02776 476 aa4.46□□□□□ -1.7
CHL1YPL008W YOR296WQ08748 1289 aa4.46□□□□□ -1.7
CHL1YPL008W QCR6P00127 147 aa4.45□□□□□ -1.7
CHL1YPL008W ARG82P07250 355 aa4.45□□□□□ -1.7
CHL1YPL008W RPS6AP0CX37 236 aaKnown RBP4.45□□□□□ -1.7
CHL1YPL008W RPS6BP0CX38 236 aaPredicted RBP4.45□□□□□ -1.7
CHL1YPL008W HEM13P11353 328 aaKnown RBP4.45□□□□□ -1.7
CHL1YPL008W RIT1P23796 513 aa4.45□□□□□ -1.7
CHL1YPL008W NAB2P32505 525 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
CHL1YPL008W BCD1P38772 366 aa4.45□□□□□ -1.7
CHL1YPL008W VPS8P39702 1274 aa4.45□□□□□ -1.7
CHL1YPL008W NOC2P39744 710 aaKnown RBP4.45□□□□□ -1.7
CHL1YPL008W SPF1P39986 1215 aaKnown RBP4.45□□□□□ -1.7
CHL1YPL008W YJL049WP47048 450 aa4.45□□□□□ -1.7
CHL1YPL008W MAL11P53048 616 aa4.45□□□□□ -1.7
CHL1YPL008W YGL138CP53122 345 aa4.45□□□□□ -1.7
CHL1YPL008W VPS75P53853 264 aa4.45□□□□□ -1.7
CHL1YPL008W EEB1Q02891 456 aa4.45□□□□□ -1.7
CHL1YPL008W VPS60Q03390 229 aa4.45□□□□□ -1.7
CHL1YPL008W MMR1Q06324 491 aa4.45□□□□□ -1.7
CHL1YPL008W PCL8Q08966 492 aa4.45□□□□□ -1.7
CHL1YPL008W CTT1P06115 562 aa4.45□□□□□ -1.7
CHL1YPL008W PCI8P40512 444 aa4.45□□□□□ -1.7
CHL1YPL008W TFG1P41895 735 aaPredicted RBP4.45□□□□□ -1.7
CHL1YPL008W RGD2P43556 714 aa4.45□□□□□ -1.7
CHL1YPL008W YNL165WP53891 406 aa4.45□□□□□ -1.7
CHL1YPL008W YNL011CP53980 444 aa4.45□□□□□ -1.7
CHL1YPL008W CIT1P00890 479 aa4.44□□□□□ -1.7
CHL1YPL008W CHO2P05374 869 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W RPP1BP10622 106 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W THR4P16120 514 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W URA1P28272 314 aaPredicted RBP4.44□□□□□ -1.7
CHL1YPL008W RPL8BP29453 256 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W HIR1P32479 840 aa4.44□□□□□ -1.7
CHL1YPL008W DEF1P35732 738 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W VID27P40157 782 aa4.44□□□□□ -1.7
CHL1YPL008W RRD1P40454 393 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W MSN5P52918 1224 aa4.44□□□□□ -1.7
CHL1YPL008W ALF1P53904 254 aa4.44□□□□□ -1.7
CHL1YPL008W JIP4Q03361 876 aa4.44□□□□□ -1.7
CHL1YPL008W WAR1Q03631 944 aa4.44□□□□□ -1.7
CHL1YPL008W CRF1Q04930 467 aa4.44□□□□□ -1.7
CHL1YPL008W RRG1Q12167 365 aaPredicted RBP4.44□□□□□ -1.7
CHL1YPL008W FAS2P19097 1887 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W HIS4P00815 799 aaKnown RBP4.44□□□□□ -1.7
CHL1YPL008W CYT1P07143 309 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms