RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W NPY1P53164 384 aa2.28□□□□□ -2.05
HER1YOR227W HOL1P53389 586 aa2.28□□□□□ -2.05
HER1YOR227W UME1Q03010 460 aa2.28□□□□□ -2.05
HER1YOR227W DPL1Q05567 589 aa2.28□□□□□ -2.05
HER1YOR227W YLR422WQ06409 1932 aa2.28□□□□□ -2.05
HER1YOR227W SWI1P09547 1314 aa2.28□□□□□ -2.05
HER1YOR227W MOD5P07884 428 aa2.27□□□□□ -2.05
HER1YOR227W BAS1P22035 811 aa2.27□□□□□ -2.05
HER1YOR227W KIP2P28743 706 aa2.27□□□□□ -2.05
HER1YOR227W ABD1P32783 436 aaPredicted RBP2.27□□□□□ -2.05
HER1YOR227W PEX6P33760 1030 aa2.27□□□□□ -2.05
HER1YOR227W ETP1P38748 585 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W IRR1P40541 1150 aa2.27□□□□□ -2.05
HER1YOR227W MRPS18P42847 217 aa2.27□□□□□ -2.05
HER1YOR227W MPP10P47083 593 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W YNL165WP53891 406 aa2.27□□□□□ -2.05
HER1YOR227W MEC3Q02574 474 aa2.27□□□□□ -2.05
HER1YOR227W SSP2Q08646 371 aa2.27□□□□□ -2.05
HER1YOR227W RTT10Q08924 1013 aa2.27□□□□□ -2.05
HER1YOR227W TIF6Q12522 245 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W HTA1P04911 132 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W HTA2P04912 132 aa2.27□□□□□ -2.05
HER1YOR227W CDC31P06704 161 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W VMA3P25515 160 aa2.27□□□□□ -2.05
HER1YOR227W DBF20P32328 564 aa2.27□□□□□ -2.05
HER1YOR227W MUM2P38236 366 aa2.27□□□□□ -2.05
HER1YOR227W YAP1801P38856 637 aa2.27□□□□□ -2.05
HER1YOR227W PEX14P53112 341 aa2.27□□□□□ -2.05
HER1YOR227W ADI1Q03677 179 aa2.27□□□□□ -2.05
HER1YOR227W YCS4Q06156 1176 aa2.27□□□□□ -2.05
HER1YOR227W VIP1Q06685 1146 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W REC8Q12188 680 aa2.27□□□□□ -2.05
HER1YOR227W TRP2P00899 507 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W SPT2P06843 333 aaPredicted RBP2.27□□□□□ -2.05
HER1YOR227W URA1P28272 314 aaPredicted RBP2.27□□□□□ -2.05
HER1YOR227W IMP2'P32351 346 aa2.27□□□□□ -2.05
HER1YOR227W SCT1P32784 759 aa2.27□□□□□ -2.05
HER1YOR227W STO1P34160 861 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W RER2P35196 286 aa2.27□□□□□ -2.05
HER1YOR227W XDJ1P39102 459 aa2.27□□□□□ -2.05
HER1YOR227W ATG3P40344 310 aa2.27□□□□□ -2.05
HER1YOR227W HSV2P50079 448 aaPredicted RBP2.27□□□□□ -2.05
HER1YOR227W MTQ2Q03920 221 aaPredicted RBP2.27□□□□□ -2.05
HER1YOR227W REH1Q06709 432 aa2.27□□□□□ -2.05
HER1YOR227W FAL1Q12099 399 aaKnown RBP2.27□□□□□ -2.05
HER1YOR227W MSB4Q12317 492 aa2.27□□□□□ -2.05
HER1YOR227W HSP60P19882 572 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W MCM10P32354 571 aa2.26□□□□□ -2.05
HER1YOR227W DAL3P32459 195 aa2.26□□□□□ -2.05
HER1YOR227W RDH54P38086 958 aa2.26□□□□□ -2.05
HER1YOR227W ERR3P42222 437 aa2.26□□□□□ -2.05
HER1YOR227W UPF3P48412 387 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W RSC1P53236 928 aa2.26□□□□□ -2.05
HER1YOR227W KRE33P53914 1056 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
HER1YOR227W TRS130Q03660 1102 aa2.26□□□□□ -2.05
HER1YOR227W HDA2Q06629 674 aa2.26□□□□□ -2.05
HER1YOR227W ALR1Q08269 859 aa2.26□□□□□ -2.05
HER1YOR227W RRP6Q12149 733 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W TOM1Q03280 3268 aa2.26□□□□□ -2.05
HER1YOR227W NAT1P12945 854 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W MSN1P22148 382 aa2.26□□□□□ -2.05
HER1YOR227W PCL2P25693 308 aa2.26□□□□□ -2.05
HER1YOR227W TPD3P31383 635 aa2.26□□□□□ -2.05
HER1YOR227W BLI1P35727 113 aa2.26□□□□□ -2.05
HER1YOR227W APL2P36000 726 aaPredicted RBP2.26□□□□□ -2.05
HER1YOR227W TRZ1P36159 838 aaPredicted RBP2.26□□□□□ -2.05
HER1YOR227W PTC4P38089 393 aa2.26□□□□□ -2.05
HER1YOR227W GGA2P38817 585 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W NTA1P40354 457 aa2.26□□□□□ -2.05
HER1YOR227W HXT8P40886 569 aa2.26□□□□□ -2.05
HER1YOR227W SAP155P43612 1002 aa2.26□□□□□ -2.05
HER1YOR227W NIT2P47016 307 aa2.26□□□□□ -2.05
HER1YOR227W PMT3P47190 753 aa2.26□□□□□ -2.05
HER1YOR227W NUT1P53114 1132 aa2.26□□□□□ -2.05
HER1YOR227W YGR250CP53316 781 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W ELP4Q02884 456 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W FRK1Q03002 865 aaPredicted RBP2.26□□□□□ -2.05
HER1YOR227W BRE4Q07660 1125 aa2.26□□□□□ -2.05
HER1YOR227W BUD20Q08004 166 aaPredicted RBP2.26□□□□□ -2.05
HER1YOR227W CMR1Q12510 522 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W LAA1P39526 2014 aa2.26□□□□□ -2.05
HER1YOR227W TY1B-AO13527 1196 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W DPB3P27344 201 aa2.26□□□□□ -2.05
HER1YOR227W BUL2Q03758 920 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W YLR225CQ05948 407 aaKnown RBP2.26□□□□□ -2.05
HER1YOR227W OXR1Q08952 273 aa2.26□□□□□ -2.05
HER1YOR227W MED1Q12321 566 aa2.26□□□□□ -2.05
HER1YOR227W HBN1Q96VH4 193 aa2.26□□□□□ -2.05
HER1YOR227W CTT1P06115 562 aa2.25□□□□□ -2.05
HER1YOR227W CIC1P38779 376 aaKnown RBP2.25□□□□□ -2.05
HER1YOR227W HXT10P43581 546 aa2.25□□□□□ -2.05
HER1YOR227W MET13P53128 600 aa2.25□□□□□ -2.05
HER1YOR227W YAP1802P53309 568 aa2.25□□□□□ -2.05
HER1YOR227W MEP3P53390 489 aa2.25□□□□□ -2.05
HER1YOR227W EAF1Q06337 982 aa2.25□□□□□ -2.05
HER1YOR227W TY4B-PA0A0B7P3V8 1104 aa2.25□□□□□ -2.05
HER1YOR227W MOT2P34909 587 aaKnown RBP2.25□□□□□ -2.05
HER1YOR227W BAP2P38084 609 aa2.25□□□□□ -2.05
HER1YOR227W NMA111P53920 997 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms