RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W RAM2P29703 316 aa8.68□□□□□ -1.02
SHC1YER096W SUV3P32580 737 aa8.68□□□□□ -1.02
SHC1YER096W BSD2P38356 321 aa8.68□□□□□ -1.02
SHC1YER096W GPB2P39717 880 aa8.68□□□□□ -1.02
SHC1YER096W GFD1Q04839 188 aaKnown RBP8.68□□□□□ -1.02
SHC1YER096W YMR321CQ04898 105 aa8.68□□□□□ -1.02
SHC1YER096W ISA1Q07821 250 aaPredicted RBP8.68□□□□□ -1.02
SHC1YER096W PGK1P00560 416 aaKnown RBP8.67□□□□□ -1.02
SHC1YER096W CLN3P13365 580 aa8.67□□□□□ -1.02
SHC1YER096W MOT2P34909 587 aaKnown RBP8.67□□□□□ -1.02
SHC1YER096W DBP7P36120 742 aaKnown RBP8.67□□□□□ -1.02
SHC1YER096W PGM2P37012 569 aaKnown RBP8.67□□□□□ -1.02
SHC1YER096W VPS29P38759 282 aa8.67□□□□□ -1.02
SHC1YER096W NUP82P40368 713 aa8.67□□□□□ -1.02
SHC1YER096W HUL4P40985 892 aa8.67□□□□□ -1.02
SHC1YER096W STR2P47164 639 aa8.67□□□□□ -1.02
SHC1YER096W SCS3P53012 380 aa8.67□□□□□ -1.02
SHC1YER096W YGR125WP53273 1036 aa8.67□□□□□ -1.02
SHC1YER096W ARK1P53974 638 aa8.67□□□□□ -1.02
SHC1YER096W SLD5Q03406 294 aa8.67□□□□□ -1.02
SHC1YER096W EBS1Q03466 884 aaKnown RBP8.67□□□□□ -1.02
SHC1YER096W CST9Q06032 482 aa8.67□□□□□ -1.02
SHC1YER096W NCR1Q12200 1170 aa8.67□□□□□ -1.02
SHC1YER096W SRD1P09007 221 aa8.66□□□□□ -1.02
SHC1YER096W TKL1P23254 680 aaKnown RBP8.66□□□□□ -1.02
SHC1YER096W PKC1P24583 1151 aa8.66□□□□□ -1.02
SHC1YER096W MRC1P25588 1096 aa8.66□□□□□ -1.02
SHC1YER096W CLB5P30283 435 aa8.66□□□□□ -1.02
SHC1YER096W YKL091CP33324 310 aaKnown RBP8.66□□□□□ -1.02
SHC1YER096W PGM1P33401 570 aaKnown RBP8.66□□□□□ -1.02
SHC1YER096W RPC25P35718 212 aa8.66□□□□□ -1.02
SHC1YER096W PXL1P36166 706 aa8.66□□□□□ -1.02
SHC1YER096W APE3P37302 537 aaKnown RBP8.66□□□□□ -1.02
SHC1YER096W REG2P38232 338 aa8.66□□□□□ -1.02
SHC1YER096W UBP5P39944 805 aa8.66□□□□□ -1.02
SHC1YER096W RSM7P47150 247 aa8.66□□□□□ -1.02
SHC1YER096W YAP7Q08182 245 aa8.66□□□□□ -1.02
SHC1YER096W YEL1P34225 687 aa8.65□□□□□ -1.02
SHC1YER096W YKR018CP36114 725 aa8.65□□□□□ -1.02
SHC1YER096W FIS1P40515 155 aa8.65□□□□□ -1.02
SHC1YER096W NBP1P52919 319 aaPredicted RBP8.65□□□□□ -1.02
SHC1YER096W PHM6Q05637 104 aa8.65□□□□□ -1.02
SHC1YER096W HCR1Q05775 265 aaKnown RBP8.65□□□□□ -1.02
SHC1YER096W YPR148CQ06523 435 aa8.65□□□□□ -1.02
SHC1YER096W CRD1Q07560 283 aa8.65□□□□□ -1.02
SHC1YER096W CDC37P06101 506 aaKnown RBP8.64□□□□□ -1.03
SHC1YER096W HOP09932 586 aa8.64□□□□□ -1.03
SHC1YER096W RPS6AP0CX37 236 aaKnown RBP8.64□□□□□ -1.03
SHC1YER096W RPS6BP0CX38 236 aaPredicted RBP8.64□□□□□ -1.03
SHC1YER096W YUR1P26725 428 aa8.64□□□□□ -1.03
SHC1YER096W TRK2P28584 889 aa8.64□□□□□ -1.03
SHC1YER096W ERC1P38767 581 aa8.64□□□□□ -1.03
SHC1YER096W RTT107P38850 1070 aa8.64□□□□□ -1.03
SHC1YER096W MGA2P40578 1113 aa8.64□□□□□ -1.03
SHC1YER096W TOS3P43637 560 aa8.64□□□□□ -1.03
SHC1YER096W CNM67P53865 581 aaKnown RBP8.64□□□□□ -1.03
SHC1YER096W TCO89Q08921 799 aa8.64□□□□□ -1.03
SHC1YER096W APL4Q12028 832 aa8.64□□□□□ -1.03
SHC1YER096W PDC1P06169 563 aaKnown RBP8.64□□□□□ -1.03
SHC1YER096W DAL7P21826 554 aa8.64□□□□□ -1.03
SHC1YER096W SEC65P29478 273 aa8.64□□□□□ -1.03
SHC1YER096W CDC19P00549 500 aaKnown RBP8.63□□□□□ -1.03
SHC1YER096W PHO13P19881 312 aa8.63□□□□□ -1.03
SHC1YER096W MNR2P35724 969 aa8.63□□□□□ -1.03
SHC1YER096W UBP15P50101 1230 aa8.63□□□□□ -1.03
SHC1YER096W TOF1P53840 1238 aa8.63□□□□□ -1.03
SHC1YER096W VPS75P53853 264 aa8.63□□□□□ -1.03
SHC1YER096W TY1B-AO13527 1196 aaKnown RBP8.62□□□□□ -1.03
SHC1YER096W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
SHC1YER096W LEO1P38439 464 aa8.62□□□□□ -1.03
SHC1YER096W MIP6P38760 659 aaKnown RBP8.62□□□□□ -1.03
SHC1YER096W SPR3P41901 512 aa8.62□□□□□ -1.03
SHC1YER096W HFM1P51979 1187 aa8.62□□□□□ -1.03
SHC1YER096W CWC2Q12046 339 aaPredicted RBP8.62□□□□□ -1.03
SHC1YER096W MOT1P32333 1867 aa8.61□□□□□ -1.03
SHC1YER096W CYC8P14922 966 aa8.61□□□□□ -1.03
SHC1YER096W OM45P16547 393 aa8.61□□□□□ -1.03
SHC1YER096W MSH3P25336 1018 aa8.61□□□□□ -1.03
SHC1YER096W TFG2P41896 400 aaPredicted RBP8.61□□□□□ -1.03
SHC1YER096W RPS7BP48164 190 aaKnown RBP8.61□□□□□ -1.03
SHC1YER096W ZPR1P53303 486 aaKnown RBP8.61□□□□□ -1.03
SHC1YER096W YPL277CQ08989 487 aa8.61□□□□□ -1.03
SHC1YER096W SPO11P23179 398 aa8.6□□□□□ -1.03
SHC1YER096W CTM1P38818 585 aa8.6□□□□□ -1.03
SHC1YER096W SPT8P38915 602 aa8.6□□□□□ -1.03
SHC1YER096W RPN3P40016 523 aaKnown RBP8.6□□□□□ -1.03
SHC1YER096W AVT1P47082 602 aa8.6□□□□□ -1.03
SHC1YER096W NCS2P53923 493 aaPredicted RBP8.6□□□□□ -1.03
SHC1YER096W DED1P06634 604 aaKnown RBP8.59□□□□□ -1.03
SHC1YER096W CDC48P25694 835 aaKnown RBP8.59□□□□□ -1.03
SHC1YER096W TFC4P33339 1025 aa8.59□□□□□ -1.03
SHC1YER096W YFL034WP43564 1073 aa8.59□□□□□ -1.03
SHC1YER096W CTR9P89105 1077 aa8.59□□□□□ -1.03
SHC1YER096W YLR225CQ05948 407 aaKnown RBP8.59□□□□□ -1.03
SHC1YER096W TY3A-GQ12173 290 aa8.59□□□□□ -1.03
SHC1YER096W TY3A-IQ99219 290 aa8.59□□□□□ -1.03
SHC1YER096W TCP1P12612 559 aaKnown RBP8.59□□□□□ -1.03
SHC1YER096W MFT1P33441 392 aaKnown RBP8.59□□□□□ -1.03
SHC1YER096W FLR1P38124 548 aa8.59□□□□□ -1.03
SHC1YER096W YAF9P53930 226 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms