RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C PGS1P25578 521 aa5.28□□□□□ -1.56
CNL1YDR357C ARE1P25628 610 aa5.28□□□□□ -1.56
CNL1YDR357C SOH1P38633 127 aa5.28□□□□□ -1.56
CNL1YDR357C BCD1P38772 366 aa5.28□□□□□ -1.56
CNL1YDR357C JEM1P40358 645 aa5.28□□□□□ -1.56
CNL1YDR357C HXT8P40886 569 aa5.28□□□□□ -1.56
CNL1YDR357C YFL034WP43564 1073 aa5.28□□□□□ -1.56
CNL1YDR357C HSV2P50079 448 aaPredicted RBP5.28□□□□□ -1.56
CNL1YDR357C YML6P51998 286 aa5.28□□□□□ -1.56
CNL1YDR357C VTC3Q02725 835 aa5.28□□□□□ -1.56
CNL1YDR357C VPS30Q02948 557 aa5.28□□□□□ -1.56
CNL1YDR357C HEH2Q03281 663 aa5.28□□□□□ -1.56
CNL1YDR357C CWC21Q03375 135 aaKnown RBP5.28□□□□□ -1.56
CNL1YDR357C EAF1Q06337 982 aa5.28□□□□□ -1.56
CNL1YDR357C BDS1Q08347 646 aa5.28□□□□□ -1.56
CNL1YDR357C SCM3Q12334 223 aa5.28□□□□□ -1.56
CNL1YDR357C SPO21Q12411 609 aa5.28□□□□□ -1.56
CNL1YDR357C CHD1P32657 1468 aa5.27□□□□□ -1.57
CNL1YDR357C TYS1P36421 394 aaKnown RBP5.27□□□□□ -1.57
CNL1YDR357C BAP2P38084 609 aa5.27□□□□□ -1.57
CNL1YDR357C SRP72P38688 640 aaKnown RBP5.27□□□□□ -1.57
CNL1YDR357C YHL041WP38730 149 aa5.27□□□□□ -1.57
CNL1YDR357C SEC9P40357 651 aa5.27□□□□□ -1.57
CNL1YDR357C SNP1Q00916 300 aaPredicted RBP5.27□□□□□ -1.57
CNL1YDR357C PTA1Q01329 785 aaPredicted RBP5.27□□□□□ -1.57
CNL1YDR357C YLR287CQ05881 355 aa5.27□□□□□ -1.57
CNL1YDR357C YLH47Q06493 454 aa5.27□□□□□ -1.57
CNL1YDR357C NOC3Q07896 663 aaPredicted RBP5.27□□□□□ -1.57
CNL1YDR357C RSC58Q07979 502 aa5.27□□□□□ -1.57
CNL1YDR357C FMP25Q08023 583 aa5.27□□□□□ -1.57
CNL1YDR357C SDH5Q08230 162 aa5.27□□□□□ -1.57
CNL1YDR357C APC11Q12157 165 aa5.27□□□□□ -1.57
CNL1YDR357C MCM1P11746 286 aa5.26□□□□□ -1.57
CNL1YDR357C GLK1P17709 500 aaKnown RBP5.26□□□□□ -1.57
CNL1YDR357C KCC4P25389 1037 aa5.26□□□□□ -1.57
CNL1YDR357C RER1P25560 188 aa5.26□□□□□ -1.57
CNL1YDR357C NIP100P33420 868 aa5.26□□□□□ -1.57
CNL1YDR357C MRP8P35719 219 aa5.26□□□□□ -1.57
CNL1YDR357C BFR1P38934 470 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CNL1YDR357C FAA3P39002 694 aa5.26□□□□□ -1.57
CNL1YDR357C ACA1P39970 489 aa5.26□□□□□ -1.57
CNL1YDR357C IRR1P40541 1150 aa5.26□□□□□ -1.57
CNL1YDR357C HIS6P40545 261 aa5.26□□□□□ -1.57
CNL1YDR357C RSC8P43609 557 aaKnown RBP5.26□□□□□ -1.57
CNL1YDR357C SAE2P46946 345 aa5.26□□□□□ -1.57
CNL1YDR357C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CNL1YDR357C RSC4Q02206 625 aa5.26□□□□□ -1.57
CNL1YDR357C FRA1Q07825 749 aa5.26□□□□□ -1.57
CNL1YDR357C SMC6Q12749 1114 aa5.26□□□□□ -1.57
CNL1YDR357C APA1P16550 321 aaKnown RBP5.25□□□□□ -1.57
CNL1YDR357C SPO16P17122 198 aa5.25□□□□□ -1.57
CNL1YDR357C PHO81P17442 1178 aa5.25□□□□□ -1.57
CNL1YDR357C GUT2P32191 649 aa5.25□□□□□ -1.57
CNL1YDR357C SUV3P32580 737 aa5.25□□□□□ -1.57
CNL1YDR357C DUT1P33317 147 aa5.25□□□□□ -1.57
CNL1YDR357C LRP1P38801 184 aaKnown RBP5.25□□□□□ -1.57
CNL1YDR357C TIF4631P39935 952 aaKnown RBP5.25□□□□□ -1.57
CNL1YDR357C RTA1P53047 317 aa5.25□□□□□ -1.57
CNL1YDR357C SHE10P53075 577 aa5.25□□□□□ -1.57
CNL1YDR357C TIM50Q02776 476 aa5.25□□□□□ -1.57
CNL1YDR357C RNH1Q04740 348 aa5.25□□□□□ -1.57
CNL1YDR357C GIC2Q06648 383 aa5.25□□□□□ -1.57
CNL1YDR357C SWA2Q06677 668 aa5.25□□□□□ -1.57
CNL1YDR357C ESC8Q08119 714 aa5.25□□□□□ -1.57
CNL1YDR357C RTT10Q08924 1013 aa5.25□□□□□ -1.57
CNL1YDR357C TMA46Q12000 345 aaKnown RBP5.25□□□□□ -1.57
CNL1YDR357C HSH49Q99181 213 aaPredicted RBP5.25□□□□□ -1.57
CNL1YDR357C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
CNL1YDR357C SBP1P10080 294 aaKnown RBP5.24□□□□□ -1.57
CNL1YDR357C CMP2P14747 604 aa5.24□□□□□ -1.57
CNL1YDR357C ESL2P36168 1195 aa5.24□□□□□ -1.57
CNL1YDR357C KTR4P38131 464 aa5.24□□□□□ -1.57
CNL1YDR357C GDH3P39708 457 aa5.24□□□□□ -1.57
CNL1YDR357C AIM9P40053 627 aaKnown RBP5.24□□□□□ -1.57
CNL1YDR357C GPP2P40106 250 aaKnown RBP5.24□□□□□ -1.57
CNL1YDR357C RET2P43621 546 aa5.24□□□□□ -1.57
CNL1YDR357C APL6P46682 809 aa5.24□□□□□ -1.57
CNL1YDR357C TAF8Q03750 510 aa5.24□□□□□ -1.57
CNL1YDR357C RAD33Q04231 177 aa5.24□□□□□ -1.57
CNL1YDR357C DAL4Q04895 635 aa5.24□□□□□ -1.57
CNL1YDR357C TOS4Q06266 489 aa5.24□□□□□ -1.57
CNL1YDR357C YDL124WQ07551 312 aaKnown RBP5.24□□□□□ -1.57
CNL1YDR357C ADY3Q07732 790 aa5.24□□□□□ -1.57
CNL1YDR357C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
CNL1YDR357C RRG1Q12167 365 aaPredicted RBP5.24□□□□□ -1.57
CNL1YDR357C RPC40P07703 335 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C VMA2P16140 517 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C AEP2P22136 580 aa5.23□□□□□ -1.57
CNL1YDR357C TRX1P22217 103 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C RAD16P31244 790 aa5.23□□□□□ -1.57
CNL1YDR357C FUN30P31380 1131 aa5.23□□□□□ -1.57
CNL1YDR357C UBS1P38290 277 aa5.23□□□□□ -1.57
CNL1YDR357C YBR197CP38306 217 aa5.23□□□□□ -1.57
CNL1YDR357C TIF5P38431 405 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C DUG1P43616 481 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C JJJ3P47138 172 aa5.23□□□□□ -1.57
CNL1YDR357C UTP8P53276 713 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C RBG2P53295 368 aaKnown RBP5.23□□□□□ -1.57
CNL1YDR357C MEP3P53390 489 aa5.23□□□□□ -1.57
CNL1YDR357C NCS2P53923 493 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms