RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C FAP1P53971 965 aa12.21□□□□□ -0.45
CNL1YDR357C MTC1P47018 478 aaKnown RBP12.14□□□□□ -0.47
CNL1YDR357C PRY3P47033 881 aa11.53□□□□□ -0.56
CNL1YDR357C YCK3P39962 524 aa10.99□□□□□ -0.65
CNL1YDR357C AAD16Q02895 342 aa10.95□□□□□ -0.66
CNL1YDR357C PRI1P10363 409 aa10.88□□□□□ -0.67
CNL1YDR357C HAA1Q12753 694 aaKnown RBP10.73□□□□□ -0.69
CNL1YDR357C DRS1P32892 752 aaKnown RBP10.72□□□□□ -0.69
CNL1YDR357C ISW2Q08773 1120 aa10.29□□□□□ -0.76
CNL1YDR357C RPG1P38249 964 aaKnown RBP10.26□□□□□ -0.77
CNL1YDR357C TSR3Q12094 313 aaKnown RBP10.24□□□□□ -0.77
CNL1YDR357C MRPL32P25348 183 aa9.81□□□□□ -0.84
CNL1YDR357C YGL015CP33199 130 aa9.72□□□□□ -0.85
CNL1YDR357C BUD31P25337 157 aaPredicted RBP9.53□□□□□ -0.88
CNL1YDR357C DIP2Q12220 943 aaPredicted RBP9.48□□□□□ -0.89
CNL1YDR357C RSE1Q04693 1361 aaKnown RBP9.36□□□□□ -0.91
CNL1YDR357C REB1P21538 810 aa9.19□□□□□ -0.94
CNL1YDR357C CDC27P38042 758 aa9.16□□□□□ -0.94
CNL1YDR357C RPL17AP05740 184 aaKnown RBP9.15□□□□□ -0.94
CNL1YDR357C RPL17BP46990 184 aaKnown RBP9.15□□□□□ -0.94
CNL1YDR357C AVT3P36062 692 aa9.11□□□□□ -0.95
CNL1YDR357C MAP2P38174 421 aaKnown RBP8.99□□□□□ -0.97
CNL1YDR357C UBP10P53874 792 aaPredicted RBP8.99□□□□□ -0.97
CNL1YDR357C BFR2Q06631 534 aaKnown RBP8.92□□□□□ -0.98
CNL1YDR357C SIS1P25294 352 aaKnown RBP8.86□□□□□ -0.99
CNL1YDR357C YKR023WP36119 530 aaKnown RBP8.86□□□□□ -0.99
CNL1YDR357C RQC2Q12532 1038 aaKnown RBP8.71□□□□□ -1.02
CNL1YDR357C DCD1P06773 312 aa8.69□□□□□ -1.02
CNL1YDR357C TFA1P36100 482 aa8.69□□□□□ -1.02
CNL1YDR357C UBP9P39967 754 aa8.69□□□□□ -1.02
CNL1YDR357C HOP09932 586 aa8.68□□□□□ -1.02
CNL1YDR357C SPT21P35209 758 aa8.68□□□□□ -1.02
CNL1YDR357C TFC8Q12308 588 aa8.66□□□□□ -1.02
CNL1YDR357C TIF4632P39936 914 aaKnown RBP8.63□□□□□ -1.03
CNL1YDR357C TGL3P40308 642 aa8.63□□□□□ -1.03
CNL1YDR357C SCY1P53009 804 aa8.61□□□□□ -1.03
CNL1YDR357C SLX5P32828 619 aaKnown RBP8.54□□□□□ -1.04
CNL1YDR357C TAF7Q05021 590 aa8.42□□□□□ -1.06
CNL1YDR357C BCH2P36122 765 aa8.35□□□□□ -1.07
CNL1YDR357C RIM101P33400 625 aa8.24□□□□□ -1.09
CNL1YDR357C YBL029C-AQ3E756 94 aa8.21□□□□□ -1.1
CNL1YDR357C MST1P07236 462 aa8.15□□□□□ -1.1
CNL1YDR357C VNX1P42839 908 aa8.06□□□□□ -1.12
CNL1YDR357C YOR238WQ08634 303 aa8.05□□□□□ -1.12
CNL1YDR357C BDF1P35817 686 aa8.04□□□□□ -1.12
CNL1YDR357C EPS1P40557 701 aa8.04□□□□□ -1.12
CNL1YDR357C OXP1P28273 1286 aa7.99□□□□□ -1.13
CNL1YDR357C SPP1Q03012 353 aa7.97□□□□□ -1.13
CNL1YDR357C AIR2Q12476 344 aaKnown RBP7.94□□□□□ -1.14
CNL1YDR357C NSR1P27476 414 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14 RIP-Chip
CNL1YDR357C YJL171CP46992 396 aa7.9□□□□□ -1.14
CNL1YDR357C WSC3Q12215 556 aa7.9□□□□□ -1.14
CNL1YDR357C FKH1P40466 484 aa7.88□□□□□ -1.15
CNL1YDR357C YAP5P40574 245 aa7.83□□□□□ -1.16
CNL1YDR357C TIF11P38912 153 aaKnown RBP7.81□□□□□ -1.16
CNL1YDR357C PTP3P40048 928 aa7.77□□□□□ -1.17
CNL1YDR357C YIL055CP40523 627 aaKnown RBP7.74□□□□□ -1.17
CNL1YDR357C BMT6Q12291 365 aa7.71□□□□□ -1.18
CNL1YDR357C LDB19Q12502 818 aa7.71□□□□□ -1.18
CNL1YDR357C RSM7P47150 247 aa7.69□□□□□ -1.18
CNL1YDR357C GTT3P39996 337 aa7.68□□□□□ -1.18
CNL1YDR357C YAH1Q12184 172 aaKnown RBP7.68□□□□□ -1.18
CNL1YDR357C BBC1P47068 1157 aa7.67□□□□□ -1.18
CNL1YDR357C ULI1P43604 169 aa7.66□□□□□ -1.18
CNL1YDR357C IOC2Q12072 812 aa7.66□□□□□ -1.18
CNL1YDR357C AI2P03876 854 aa7.65□□□□□ -1.18
CNL1YDR357C LEO1P38439 464 aa7.63□□□□□ -1.19
CNL1YDR357C DMA1P38823 416 aa7.61□□□□□ -1.19
CNL1YDR357C YLR271WQ06152 274 aa7.55□□□□□ -1.2
CNL1YDR357C PIB1Q06651 286 aa7.53□□□□□ -1.2
CNL1YDR357C PSD2P53037 1138 aaKnown RBP7.48□□□□□ -1.21
CNL1YDR357C RTG1P32607 177 aa7.47□□□□□ -1.21
CNL1YDR357C MSB4Q12317 492 aa7.45□□□□□ -1.22
CNL1YDR357C EAP1P36041 632 aaKnown RBP7.44□□□□□ -1.22
CNL1YDR357C NCR1Q12200 1170 aa7.44□□□□□ -1.22
CNL1YDR357C TRP5P00931 707 aaKnown RBP7.4□□□□□ -1.22
CNL1YDR357C SET4P42948 560 aa7.38□□□□□ -1.23
CNL1YDR357C MRM1P25270 412 aa7.37□□□□□ -1.23
CNL1YDR357C YOL036WQ08206 761 aa7.37□□□□□ -1.23
CNL1YDR357C SSP1P38871 571 aa7.36□□□□□ -1.23
CNL1YDR357C YNL035CP53962 389 aaKnown RBP7.35□□□□□ -1.23
CNL1YDR357C SEC61P32915 480 aa7.34□□□□□ -1.23
CNL1YDR357C CST9Q06032 482 aa7.34□□□□□ -1.23
CNL1YDR357C RGA2Q06407 1009 aa7.31□□□□□ -1.24
CNL1YDR357C BCK2P33306 851 aa7.3□□□□□ -1.24
CNL1YDR357C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
CNL1YDR357C SAP30P38429 201 aa7.25□□□□□ -1.25
CNL1YDR357C VPS29P38759 282 aa7.24□□□□□ -1.25
CNL1YDR357C TFG1P41895 735 aaPredicted RBP7.24□□□□□ -1.25
CNL1YDR357C CHL1P22516 861 aaPredicted RBP7.21□□□□□ -1.26
CNL1YDR357C RCR1P38212 213 aa7.21□□□□□ -1.26
CNL1YDR357C DBP1P24784 617 aaKnown RBP7.19□□□□□ -1.26
CNL1YDR357C STS1P38637 319 aa7.19□□□□□ -1.26
CNL1YDR357C DAN4P47179 1161 aa7.19□□□□□ -1.26
CNL1YDR357C VMA1P17255 1071 aaKnown RBP7.18□□□□□ -1.26
CNL1YDR357C MGA2P40578 1113 aa7.18□□□□□ -1.26
CNL1YDR357C YFR006WP43590 535 aa7.18□□□□□ -1.26
CNL1YDR357C YMR1P47147 688 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
CNL1YDR357C SAM3Q08986 587 aa7.17□□□□□ -1.26
CNL1YDR357C PRE3P38624 215 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms