RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W YLR419WQ06698 1435 aaKnown RBP5.38□□□□□ -1.55
RET3YPL010W CDC3P32457 520 aaKnown RBP5.37□□□□□ -1.55
RET3YPL010W ELM1P32801 640 aa5.37□□□□□ -1.55
RET3YPL010W ECM2P38241 364 aaKnown RBP5.37□□□□□ -1.55
RET3YPL010W AOS1Q06624 347 aa5.37□□□□□ -1.55
RET3YPL010W SIR4P11978 1358 aa5.37□□□□□ -1.55
RET3YPL010W RPO41P13433 1351 aaKnown RBP5.37□□□□□ -1.55
RET3YPL010W FLP1P03870 423 aa5.36□□□□□ -1.55
RET3YPL010W ERT1P38140 529 aa5.36□□□□□ -1.55
RET3YPL010W BSC2Q05611 235 aa5.36□□□□□ -1.55
RET3YPL010W YOR059CQ08448 450 aaKnown RBP5.36□□□□□ -1.55
RET3YPL010W MHP1P43638 1398 aa5.35□□□□□ -1.55
RET3YPL010W RPS9BP05755 195 aaKnown RBP5.35□□□□□ -1.55
RET3YPL010W OSM1P21375 501 aaKnown RBP5.35□□□□□ -1.55
RET3YPL010W ARL1P38116 183 aaKnown RBP5.35□□□□□ -1.55
RET3YPL010W MMM1P41800 426 aa5.35□□□□□ -1.55
RET3YPL010W AVT1P47082 602 aa5.35□□□□□ -1.55
RET3YPL010W GRX4P32642 244 aa5.34□□□□□ -1.55
RET3YPL010W GPT2P36148 743 aa5.34□□□□□ -1.55
RET3YPL010W MDJ2P42834 146 aa5.34□□□□□ -1.55
RET3YPL010W CIT3P43635 486 aa5.34□□□□□ -1.55
RET3YPL010W NUT1P53114 1132 aa5.34□□□□□ -1.55
RET3YPL010W ORC1P54784 914 aaPredicted RBP5.34□□□□□ -1.55
RET3YPL010W DOT1Q04089 582 aaKnown RBP5.34□□□□□ -1.55
RET3YPL010W PMT7Q06644 662 aa5.34□□□□□ -1.55
RET3YPL010W TY4B-HP0C2J7 1802 aa5.33□□□□□ -1.56
RET3YPL010W TY4B-JP47024 1803 aa5.33□□□□□ -1.56
RET3YPL010W YBP2P53169 641 aa5.33□□□□□ -1.56
RET3YPL010W KIN4Q01919 800 aa5.33□□□□□ -1.56
RET3YPL010W NYV1Q12255 253 aa5.33□□□□□ -1.56
RET3YPL010W GEF1P37020 779 aa5.32□□□□□ -1.56
RET3YPL010W YHL008CP38750 627 aa5.32□□□□□ -1.56
RET3YPL010W YAF9P53930 226 aa5.32□□□□□ -1.56
RET3YPL010W GCD1P09032 578 aaPredicted RBP5.31□□□□□ -1.56
RET3YPL010W ERP5P38819 212 aa5.31□□□□□ -1.56
RET3YPL010W RVS167P39743 482 aaKnown RBP5.31□□□□□ -1.56
RET3YPL010W TAP42Q04372 366 aa5.31□□□□□ -1.56
RET3YPL010W RIX7Q07844 837 aaKnown RBP5.31□□□□□ -1.56
RET3YPL010W INP54Q08227 384 aaKnown RBP5.31□□□□□ -1.56
RET3YPL010W NSI1Q12457 570 aa5.31□□□□□ -1.56
RET3YPL010W SEA4P38164 1038 aa5.3□□□□□ -1.56
RET3YPL010W PFF1P38244 976 aa5.3□□□□□ -1.56
RET3YPL010W ECL1P48235 211 aa5.3□□□□□ -1.56
RET3YPL010W ALT1P52893 592 aa5.3□□□□□ -1.56
RET3YPL010W GPI13Q07830 1017 aa5.3□□□□□ -1.56
RET3YPL010W YRF1-3P0CX14 1859 aa5.3□□□□□ -1.56
RET3YPL010W YRF1-7P0CX15 1859 aa5.3□□□□□ -1.56
RET3YPL010W YRF1-6P53819 1859 aa5.3□□□□□ -1.56
RET3YPL010W SEC3P33332 1336 aaKnown RBP5.29□□□□□ -1.56
RET3YPL010W WHI3P34761 661 aaKnown RBP5.29□□□□□ -1.56
RET3YPL010W GRS1P38088 690 aaKnown RBP5.29□□□□□ -1.56
RET3YPL010W REI1P38344 393 aaPredicted RBP5.29□□□□□ -1.56
RET3YPL010W SDH1Q00711 640 aa5.29□□□□□ -1.56
RET3YPL010W CTF4Q01454 927 aa5.29□□□□□ -1.56
RET3YPL010W NUT2Q06213 157 aa5.29□□□□□ -1.56
RET3YPL010W CTI6Q08923 506 aa5.29□□□□□ -1.56
RET3YPL010W YBL113CQ7M4S9 792 aa5.29□□□□□ -1.56
RET3YPL010W FKS3Q04952 1785 aa5.29□□□□□ -1.56
RET3YPL010W RPS4AP0CX35 261 aaKnown RBP5.28□□□□□ -1.56
RET3YPL010W RPS4BP0CX36 261 aaKnown RBP5.28□□□□□ -1.56
RET3YPL010W RET1P22276 1149 aaKnown RBP5.28□□□□□ -1.56
RET3YPL010W MSH4P40965 878 aaPredicted RBP5.28□□□□□ -1.56
RET3YPL010W OYE3P41816 400 aaPredicted RBP5.28□□□□□ -1.56
RET3YPL010W SAM37P50110 327 aa5.28□□□□□ -1.56
RET3YPL010W DUS1P53759 423 aaKnown RBP5.28□□□□□ -1.56
RET3YPL010W ORC3P54790 616 aa5.28□□□□□ -1.56
RET3YPL010W FRT1Q99332 602 aa5.28□□□□□ -1.56
RET3YPL010W YML133CQ03099 1374 aa5.28□□□□□ -1.56
RET3YPL010W YLL067CQ07888 1374 aa5.28□□□□□ -1.56
RET3YPL010W YLL066CQ99208 1374 aa5.28□□□□□ -1.56
RET3YPL010W TOP1P04786 769 aa5.27□□□□□ -1.57
RET3YPL010W LPD1P09624 499 aaKnown RBP5.27□□□□□ -1.57
RET3YPL010W SHC1P39000 512 aa5.27□□□□□ -1.57
RET3YPL010W NIT1P40447 199 aa5.27□□□□□ -1.57
RET3YPL010W MDG1P53885 366 aa5.27□□□□□ -1.57
RET3YPL010W IRC3Q06683 689 aa5.27□□□□□ -1.57
RET3YPL010W NOC3Q07896 663 aaPredicted RBP5.27□□□□□ -1.57
RET3YPL010W TOM1Q03280 3268 aa5.27□□□□□ -1.57
RET3YPL010W APC1P53886 1748 aa5.26□□□□□ -1.57
RET3YPL010W THS1P04801 734 aaKnown RBP5.26□□□□□ -1.57
RET3YPL010W MCM5P29496 775 aaKnown RBP5.26□□□□□ -1.57
RET3YPL010W HSP104P31539 908 aaKnown RBP5.26□□□□□ -1.57
RET3YPL010W SMY1P32364 656 aaKnown RBP5.26□□□□□ -1.57
RET3YPL010W YKU70P32807 602 aa5.26□□□□□ -1.57
RET3YPL010W EXO5P38289 585 aa5.26□□□□□ -1.57
RET3YPL010W SHU2P38957 223 aa5.26□□□□□ -1.57
RET3YPL010W BUD27P43573 796 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
RET3YPL010W YGR045CP53229 120 aa5.26□□□□□ -1.57
RET3YPL010W NOG1Q02892 647 aaKnown RBP5.26□□□□□ -1.57
RET3YPL010W YCS4Q06156 1176 aa5.26□□□□□ -1.57
RET3YPL010W HAT1Q12341 374 aa5.26□□□□□ -1.57
RET3YPL010W DFG16Q99234 619 aa5.26□□□□□ -1.57
RET3YPL010W TY1A-LR4P0C2I8 440 aaKnown RBP5.25□□□□□ -1.57
RET3YPL010W TY1A-DR6P0CX70 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-ER1P0CX71 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-LR2P0CX72 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-PLP0CX73 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-JR1P0CX74 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-LR3P0CX75 440 aa5.25□□□□□ -1.57
RET3YPL010W TY1A-ML2P0CX76 440 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms