RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	SMC1	P32908	1225 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	PEX6	P33760	1030 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	GLY1	P37303	387 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	TCD1	P38756	429 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	CIN4	P39110	191 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	DSS1	P39112	969 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	ICP55	P40051	511 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	UTP7	P40055	554 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	YIR007W	P40566	764 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	ALR2	P43553	858 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	SPC105	P53148	917 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	KXD1	P53158	218 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	RSC4	Q02206	625 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	SYH1	Q02875	849 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	TAF8	Q03750	510 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	LCD1	Q04377	747 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	YCS4	Q06156	1176 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	RTT10	Q08924	1013 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	PUS1	Q12211	544 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	TIF6	Q12522	245 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	ARO1	P08566	1588 aa	Known RBP	4.15	□□□□□ -1.74
LDS2	YOL047C	PLC1	P32383	869 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	MFT1	P33441	392 aa	Known RBP	4.15	□□□□□ -1.75
LDS2	YOL047C	GGA2	P38817	585 aa	Known RBP	4.15	□□□□□ -1.75
LDS2	YOL047C	RGD2	P43556	714 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	HXT10	P43581	546 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	LSB3	P43603	459 aa	Known RBP	4.15	□□□□□ -1.75
LDS2	YOL047C	UBA2	P52488	636 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	MAL11	P53048	616 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	SCW11	P53189	542 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	ERP6	P53198	216 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	YNL193W	P53870	558 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	YDL144C	Q07589	356 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	YBT1	P32386	1661 aa		4.15	□□□□□ -1.75
LDS2	YOL047C	TY1B-DR3	Q99231	1755 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	TRP2	P00899	507 aa	Known RBP	4.14	□□□□□ -1.75
LDS2	YOL047C	INH1	P01097	85 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	SBP1	P10080	294 aa	Known RBP	4.14	□□□□□ -1.75
LDS2	YOL047C	DPB3	P27344	201 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	MKK2	P32491	506 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	BYE1	P36106	594 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	YBR071W	P38243	211 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	PEA2	P40091	420 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	HUL4	P40985	892 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	PMT3	P47190	753 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	SDA1	P53313	767 aa	Known RBP	4.14	□□□□□ -1.75
LDS2	YOL047C	ESF2	P53743	316 aa	Known RBP	4.14	□□□□□ -1.75
LDS2	YOL047C	UBX4	P54730	416 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	ADI1	Q03677	179 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	PLP2	Q12017	286 aa		4.14	□□□□□ -1.75
LDS2	YOL047C	COB	P00163	385 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	FLP1	P03870	423 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	ATP4	P05626	244 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	TOP3	P13099	656 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	OPI1	P21957	404 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	MRS6	P32864	603 aa	Known RBP	4.13	□□□□□ -1.75
LDS2	YOL047C	BLI1	P35727	113 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	TYS1	P36421	394 aa	Known RBP	4.13	□□□□□ -1.75
LDS2	YOL047C	BAP2	P38084	609 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	GDH3	P39708	457 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	PSY2	P40164	858 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	SEC26	P41810	973 aa	Known RBP	4.13	□□□□□ -1.75
LDS2	YOL047C	PIP2	P52960	996 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	MET14	Q02196	202 aa		4.13	□□□□□ -1.75
LDS2	YOL047C	PDR12	Q02785	1511 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	FOB1	O13329	566 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	HSP82	P02829	709 aa	Known RBP	4.12	□□□□□ -1.75
LDS2	YOL047C	GAL1	P04385	528 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	SRP54	P20424	541 aa	Known RBP	4.12	□□□□□ -1.75
LDS2	YOL047C	MSN1	P22148	382 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	GFD2	P25370	566 aa	Known RBP	4.12	□□□□□ -1.75
LDS2	YOL047C	DUR3	P33413	735 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	LTV1	P34078	463 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	YBR284W	P38150	797 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	SIC1	P38634	284 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	MBP1	P39678	833 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	NDE1	P40215	560 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	IRR1	P40541	1150 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
LDS2	YOL047C	NUP85	P46673	744 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	VPS4	P52917	437 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	YNL165W	P53891	406 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	MEH1	Q02205	184 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	HOS3	Q02959	697 aa	Known RBP	4.12	□□□□□ -1.75
LDS2	YOL047C	VPS60	Q03390	229 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	COG8	Q04632	607 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	YDL124W	Q07551	312 aa	Known RBP	4.12	□□□□□ -1.75
LDS2	YOL047C	RAD9	P14737	1309 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-LR1	P0C2J3	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-F	P0CX63	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-GR2	P0CX64	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-C	P25384	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-DR2	Q03494	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY1B-DR1	Q03855	1755 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-OR1	Q12113	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-DR1	Q12472	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	TY2B-OR2	Q12501	1770 aa		4.12	□□□□□ -1.75
LDS2	YOL047C	MDS3	P53094	1487 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	IQG1	Q12280	1495 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms