RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	VMA22	P38784	181 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	YTA12	P40341	825 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	MAD1	P40957	749 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TAF1	P46677	1066 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	NOP9	P47077	666 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	MSH6	Q03834	1242 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	ARP9	Q05123	467 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	GGA1	Q06336	557 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	SPP382	Q06411	708 aa	Predicted RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	UTP4	Q06679	776 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	NHA1	Q99271	985 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TAL1	P15019	335 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	HSC82	P15108	705 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	UBP1	P25037	809 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	RAD57	P25301	460 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	SHM1	P37292	490 aa	Predicted RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	YBP1	P38315	674 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	APE4	P38821	490 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	REV7	P38927	245 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	SCS2	P40075	244 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	PCL10	P53124	433 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-LR1	P0C2J3	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-F	P0CX63	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-GR2	P0CX64	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-C	P25384	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-DR2	Q03494	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY1B-DR1	Q03855	1755 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-OR1	Q12113	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-DR1	Q12472	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	TY2B-OR2	Q12501	1770 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	CDC10	P25342	322 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	KCC4	P25389	1037 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	PEP3	P27801	918 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	HEM3	P28789	327 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	XRS2	P33301	854 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	PET112	P33893	541 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	YKR078W	P36158	585 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	SWC5	P38326	303 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	KIC1	P38692	1080 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	YMR147W	P40218	223 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	MRD1	Q06106	887 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	CWC2	Q12046	339 aa	Predicted RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	ADE6	P38972	1358 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	PGI1	P12709	554 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	NAT1	P12945	854 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SEC23	P15303	768 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SIN4	P32259	974 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	PEX5	P35056	612 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	LIN1	P38852	340 aa	Predicted RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	IPL1	P38991	367 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	AIM21	P40563	679 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	LSC2	P53312	427 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	NCS2	P53923	493 aa	Predicted RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	MUB1	Q03162	620 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	NOC3	Q07896	663 aa	Predicted RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	PDR12	Q02785	1511 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	BAS1	P22035	811 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	RPN2	P32565	945 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	GGA2	P38817	585 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	ERP5	P38819	212 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	STN1	P38960	494 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	RRP8	P38961	392 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SMC2	P38989	1170 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	RLP7	P40693	322 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	RPC17	P47076	161 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	TMA22	P47089	198 aa	Predicted RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	EBS1	Q03466	884 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	CEF1	Q03654	590 aa	Predicted RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	PIG1	Q06216	648 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	HMI1	Q12039	706 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	NTE1	Q04958	1679 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	RPN10	P38886	268 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SHC1	P39000	512 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	YFL034W	P43564	1073 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	IES1	P43579	692 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	RNR4	P49723	345 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SHE10	P53075	577 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	VTC3	Q02725	835 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	SLU7	Q02775	382 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SYF1	Q04048	859 aa	Predicted RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	ATG17	Q06410	417 aa		4.55	□□□□□ -1.68
VAC7	YNL054W	NOP6	Q07623	225 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	SGT2	Q12118	346 aa	Known RBP	4.55	□□□□□ -1.68
VAC7	YNL054W	PEA2	P40091	420 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	EFM4	P40516	257 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	PXA1	P41909	870 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	URB2	P47108	1174 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	YGR237C	P50089	785 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	LSG1	P53145	640 aa	Known RBP	4.54	□□□□□ -1.68
VAC7	YNL054W	COS6	P53344	381 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	ADE16	P54113	591 aa	Known RBP	4.54	□□□□□ -1.68
VAC7	YNL054W	INP2	Q03824	705 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	YMR196W	Q04336	1088 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	VTI1	Q04338	217 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	SVF1	Q05515	481 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	PNP1	Q05788	311 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	TAF10	Q12030	206 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	SEY1	Q99287	776 aa		4.54	□□□□□ -1.68
VAC7	YNL054W	VMR1	P38735	1592 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms