RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W STE20Q03497 939 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W SLP1Q12232 587 aa2.8□□□□□ -1.96
UBP15YMR304W RPS3P05750 240 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W PXL1P36166 706 aa2.8□□□□□ -1.96
UBP15YMR304W PAM1P37304 830 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W TAF1P46677 1066 aa2.8□□□□□ -1.96
UBP15YMR304W BFA1P47113 574 aa2.8□□□□□ -1.96
UBP15YMR304W PTK2P47116 818 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W SKY1Q03656 742 aa2.8□□□□□ -1.96
UBP15YMR304W KAR3P17119 729 aa2.8□□□□□ -1.96
UBP15YMR304W PTP1P25044 335 aa2.8□□□□□ -1.96
UBP15YMR304W CDC10P25342 322 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W SFB3P38810 929 aa2.8□□□□□ -1.96
UBP15YMR304W ADE16P54113 591 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W TRL1P09880 827 aaKnown RBP2.79□□□□□ -1.96
UBP15YMR304W OSM1P21375 501 aaKnown RBP2.79□□□□□ -1.96
UBP15YMR304W VAC17P25591 423 aa2.79□□□□□ -1.96
UBP15YMR304W MSP1P28737 362 aa2.79□□□□□ -1.96
UBP15YMR304W CSE1P33307 960 aa2.79□□□□□ -1.96
UBP15YMR304W HXT5P38695 592 aa2.79□□□□□ -1.96
UBP15YMR304W HUL4P40985 892 aa2.79□□□□□ -1.96
UBP15YMR304W CUS1Q02554 436 aaPredicted RBP2.79□□□□□ -1.96
UBP15YMR304W UBP16Q02863 499 aa2.79□□□□□ -1.96
UBP15YMR304W YML020WQ03722 664 aa2.79□□□□□ -1.96
UBP15YMR304W SSP2Q08646 371 aa2.79□□□□□ -1.96
UBP15YMR304W PER1P25625 357 aa2.79□□□□□ -1.96
UBP15YMR304W BLI1P35727 113 aa2.79□□□□□ -1.96
UBP15YMR304W RGA1P39083 1007 aa2.79□□□□□ -1.96
UBP15YMR304W TY4A-JP47023 414 aa2.79□□□□□ -1.96
UBP15YMR304W YJL045WP47052 634 aa2.79□□□□□ -1.96
UBP15YMR304W YNL247WP53852 767 aaKnown RBP2.79□□□□□ -1.96
UBP15YMR304W MRS2Q01926 470 aa2.79□□□□□ -1.96
UBP15YMR304W STF2P16965 84 aa2.79□□□□□ -1.96
UBP15YMR304W ICL1P28240 557 aaPredicted RBP2.79□□□□□ -1.96
UBP15YMR304W SEC20P28791 383 aa2.79□□□□□ -1.96
UBP15YMR304W SWC3P31376 625 aa2.79□□□□□ -1.96
UBP15YMR304W VAB2P40003 282 aa2.79□□□□□ -1.96
UBP15YMR304W RAD26P40352 1085 aa2.79□□□□□ -1.96
UBP15YMR304W REX2P54964 269 aaKnown RBP2.79□□□□□ -1.96
UBP15YMR304W YPL062WQ02781 134 aa2.79□□□□□ -1.96
UBP15YMR304W YLR346CQ06139 101 aa2.79□□□□□ -1.96
UBP15YMR304W ACK1Q07622 623 aaPredicted RBP2.79□□□□□ -1.96
UBP15YMR304W TEC1P18412 486 aa2.78□□□□□ -1.96
UBP15YMR304W TSR4P25040 408 aa2.78□□□□□ -1.96
UBP15YMR304W GUA1P38625 525 aaKnown RBP2.78□□□□□ -1.96
UBP15YMR304W RTR1P40084 226 aaPredicted RBP2.78□□□□□ -1.96
UBP15YMR304W VPS27P40343 622 aaKnown RBP2.78□□□□□ -1.96
UBP15YMR304W VID28P40547 921 aa2.78□□□□□ -1.96
UBP15YMR304W MSH4P40965 878 aaPredicted RBP2.78□□□□□ -1.96
UBP15YMR304W YBP2P53169 641 aa2.78□□□□□ -1.96
UBP15YMR304W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
UBP15YMR304W RMT2Q03305 412 aa2.78□□□□□ -1.96
UBP15YMR304W LCB5Q06147 687 aaKnown RBP2.78□□□□□ -1.96
UBP15YMR304W MET7Q08645 548 aa2.78□□□□□ -1.96
UBP15YMR304W RRP6Q12149 733 aaKnown RBP2.78□□□□□ -1.96
UBP15YMR304W SEC39Q12745 709 aa2.78□□□□□ -1.96
UBP15YMR304W TAF13P11747 167 aa2.78□□□□□ -1.96
UBP15YMR304W PCT1P13259 424 aa2.78□□□□□ -1.96
UBP15YMR304W PSO2P30620 661 aa2.78□□□□□ -1.96
UBP15YMR304W SEC8P32855 1065 aa2.78□□□□□ -1.96
UBP15YMR304W TFC3P34111 1160 aa2.78□□□□□ -1.96
UBP15YMR304W CSE4P36012 229 aa2.78□□□□□ -1.96
UBP15YMR304W ROK1P45818 564 aaPredicted RBP2.78□□□□□ -1.96
UBP15YMR304W PRP3Q03338 469 aaPredicted RBP2.78□□□□□ -1.96
UBP15YMR304W STE11P23561 717 aa2.78□□□□□ -1.97
UBP15YMR304W CDC60P26637 1090 aaKnown RBP2.78□□□□□ -1.97
UBP15YMR304W LTV1P34078 463 aa2.78□□□□□ -1.97
UBP15YMR304W OLA1P38219 394 aaKnown RBP2.78□□□□□ -1.97
UBP15YMR304W MEP1P40260 492 aa2.78□□□□□ -1.97
UBP15YMR304W FIG4P42837 879 aa2.78□□□□□ -1.97
UBP15YMR304W ECL1P48235 211 aa2.78□□□□□ -1.97
UBP15YMR304W OYE2Q03558 400 aaKnown RBP2.78□□□□□ -1.97
UBP15YMR304W VTI1Q04338 217 aa2.78□□□□□ -1.97
UBP15YMR304W DIS3Q08162 1001 aaKnown RBP2.78□□□□□ -1.97
UBP15YMR304W RKM4Q12504 494 aa2.78□□□□□ -1.97
UBP15YMR304W SET6Q12529 373 aa2.78□□□□□ -1.97
UBP15YMR304W PET122P10355 254 aa2.77□□□□□ -1.97
UBP15YMR304W IRE1P32361 1115 aa2.77□□□□□ -1.97
UBP15YMR304W MKS1P34072 584 aa2.77□□□□□ -1.97
UBP15YMR304W APD1P38281 316 aa2.77□□□□□ -1.97
UBP15YMR304W SAF1P38352 637 aa2.77□□□□□ -1.97
UBP15YMR304W YIR042CP40586 236 aa2.77□□□□□ -1.97
UBP15YMR304W RCM1P53972 490 aa2.77□□□□□ -1.97
UBP15YMR304W HEH2Q03281 663 aa2.77□□□□□ -1.97
UBP15YMR304W COG8Q04632 607 aa2.77□□□□□ -1.97
UBP15YMR304W MDM36Q06820 579 aa2.77□□□□□ -1.97
UBP15YMR304W ARG82P07250 355 aa2.77□□□□□ -1.97
UBP15YMR304W THR4P16120 514 aaKnown RBP2.77□□□□□ -1.97
UBP15YMR304W PES4P39684 611 aa2.77□□□□□ -1.97
UBP15YMR304W FAA4P47912 694 aaKnown RBP2.77□□□□□ -1.97
UBP15YMR304W ECM11Q04110 302 aa2.77□□□□□ -1.97
UBP15YMR304W YMR111CQ04461 462 aaPredicted RBP2.77□□□□□ -1.97
UBP15YMR304W HSP42Q12329 375 aa2.77□□□□□ -1.97
UBP15YMR304W SEC6P32844 805 aa2.77□□□□□ -1.97
UBP15YMR304W MRT4P33201 236 aaKnown RBP2.77□□□□□ -1.97
UBP15YMR304W MET1P36150 593 aa2.77□□□□□ -1.97
UBP15YMR304W YBL036CP38197 257 aa2.77□□□□□ -1.97
UBP15YMR304W CCC2P38995 1004 aa2.77□□□□□ -1.97
UBP15YMR304W RSC1P53236 928 aa2.77□□□□□ -1.97
UBP15YMR304W DNM1P54861 757 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms