RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W HEM3P28789 327 aa1.63□□□□□ -2.15
PRP16YKR086W ASF1P32447 279 aa1.63□□□□□ -2.15
PRP16YKR086W FAA3P39002 694 aa1.63□□□□□ -2.15
PRP16YKR086W SLS1P42900 643 aa1.63□□□□□ -2.15
PRP16YKR086W SNU71P53207 620 aaKnown RBP1.63□□□□□ -2.15
PRP16YKR086W SDH1Q00711 640 aa1.63□□□□□ -2.15
PRP16YKR086W RSB1Q08417 382 aa1.63□□□□□ -2.15
PRP16YKR086W TY1B-DR3Q99231 1755 aa1.63□□□□□ -2.15
PRP16YKR086W STU1P38198 1513 aa1.63□□□□□ -2.15
PRP16YKR086W VMR1P38735 1592 aa1.63□□□□□ -2.15
PRP16YKR086W CYC7P00045 113 aa1.62□□□□□ -2.15
PRP16YKR086W LIP5P32875 414 aa1.62□□□□□ -2.15
PRP16YKR086W OMA1P36163 345 aa1.62□□□□□ -2.15
PRP16YKR086W ABZ1P37254 787 aaPredicted RBP1.62□□□□□ -2.15
PRP16YKR086W TOS1P38288 455 aa1.62□□□□□ -2.15
PRP16YKR086W RPS26AP39938 119 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W RPS26BP39939 119 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W MRPS18P42847 217 aa1.62□□□□□ -2.15
PRP16YKR086W RCL1Q08096 367 aaPredicted RBP1.62□□□□□ -2.15
PRP16YKR086W ALG6Q12001 544 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W YOR223WQ12015 292 aa1.62□□□□□ -2.15
PRP16YKR086W YVC1Q12324 675 aa1.62□□□□□ -2.15
PRP16YKR086W TOP2P06786 1428 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W SEC23P15303 768 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W SEG2P34250 1132 aa1.62□□□□□ -2.15
PRP16YKR086W HSE1P38753 452 aa1.62□□□□□ -2.15
PRP16YKR086W YGR045CP53229 120 aa1.62□□□□□ -2.15
PRP16YKR086W FAR11P53917 953 aa1.62□□□□□ -2.15
PRP16YKR086W UTP5Q04177 643 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W ATE1P16639 503 aa1.62□□□□□ -2.15
PRP16YKR086W MAC1P35192 417 aa1.62□□□□□ -2.15
PRP16YKR086W BAP2P38084 609 aa1.62□□□□□ -2.15
PRP16YKR086W ARL1P38116 183 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W UTP22P53254 1237 aaPredicted RBP1.62□□□□□ -2.15
PRP16YKR086W ELA1P53861 379 aaPredicted RBP1.62□□□□□ -2.15
PRP16YKR086W YPL109CQ02981 657 aa1.62□□□□□ -2.15
PRP16YKR086W AOS1Q06624 347 aa1.62□□□□□ -2.15
PRP16YKR086W GIC2Q06648 383 aa1.62□□□□□ -2.15
PRP16YKR086W NOP8Q08287 484 aaPredicted RBP1.62□□□□□ -2.15
PRP16YKR086W MSC6Q08818 692 aaKnown RBP1.62□□□□□ -2.15
PRP16YKR086W MSB1P21339 1137 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W BAS1P22035 811 aa1.61□□□□□ -2.15
PRP16YKR086W RNQ1P25367 405 aa1.61□□□□□ -2.15
PRP16YKR086W RVS167P39743 482 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W YGL140CP53120 1219 aa1.61□□□□□ -2.15
PRP16YKR086W ULP1Q02724 621 aa1.61□□□□□ -2.15
PRP16YKR086W ARO1P08566 1588 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W PAN1P32521 1480 aa1.61□□□□□ -2.15
PRP16YKR086W PRI2P20457 528 aa1.61□□□□□ -2.15
PRP16YKR086W MSH3P25336 1018 aa1.61□□□□□ -2.15
PRP16YKR086W WHI3P34761 661 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W NMD3P38861 518 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W TAF1P46677 1066 aa1.61□□□□□ -2.15
PRP16YKR086W DOT1Q04089 582 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W YLL054CQ12244 843 aa1.61□□□□□ -2.15
PRP16YKR086W SEC8P32855 1065 aa1.61□□□□□ -2.15
PRP16YKR086W PRP40P33203 583 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W REI1P38344 393 aaPredicted RBP1.61□□□□□ -2.15
PRP16YKR086W AVT1P47082 602 aa1.61□□□□□ -2.15
PRP16YKR086W YCS4Q06156 1176 aa1.61□□□□□ -2.15
PRP16YKR086W PMT7Q06644 662 aa1.61□□□□□ -2.15
PRP16YKR086W WRS1Q12109 432 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W RIB2Q12362 591 aaKnown RBP1.61□□□□□ -2.15
PRP16YKR086W SMY2P32909 740 aaKnown RBP1.6□□□□□ -2.15
PRP16YKR086W DUT1P33317 147 aa1.6□□□□□ -2.15
PRP16YKR086W MOT2P34909 587 aaKnown RBP1.6□□□□□ -2.15
PRP16YKR086W NUP188P52593 1655 aaKnown RBP1.6□□□□□ -2.15
PRP16YKR086W RPS4AP0CX35 261 aaKnown RBP1.6□□□□□ -2.15
PRP16YKR086W RPS4BP0CX36 261 aaKnown RBP1.6□□□□□ -2.15
PRP16YKR086W SRM1P21827 482 aa1.6□□□□□ -2.15
PRP16YKR086W PET112P33893 541 aa1.6□□□□□ -2.15
PRP16YKR086W MMM1P41800 426 aa1.6□□□□□ -2.15
PRP16YKR086W XKS1P42826 600 aa1.6□□□□□ -2.15
PRP16YKR086W SPO20Q04359 397 aa1.6□□□□□ -2.15
PRP16YKR086W FAL1Q12099 399 aaKnown RBP1.6□□□□□ -2.15
PRP16YKR086W CDC6P09119 513 aa1.59□□□□□ -2.15
PRP16YKR086W SNF5P18480 905 aa1.59□□□□□ -2.15
PRP16YKR086W PPH3P32345 308 aa1.59□□□□□ -2.15
PRP16YKR086W VAC8P39968 578 aa1.59□□□□□ -2.15
PRP16YKR086W CIT3P43635 486 aa1.59□□□□□ -2.15
PRP16YKR086W YJR107WP47145 328 aa1.59□□□□□ -2.15
PRP16YKR086W YDR132CQ03900 495 aa1.59□□□□□ -2.15
PRP16YKR086W SPR28Q04921 423 aa1.59□□□□□ -2.15
PRP16YKR086W DFG16Q99234 619 aa1.59□□□□□ -2.15
PRP16YKR086W CHD1P32657 1468 aa1.59□□□□□ -2.15
PRP16YKR086W VMA4P22203 233 aaKnown RBP1.59□□□□□ -2.16
PRP16YKR086W HSP78P33416 811 aa1.59□□□□□ -2.16
PRP16YKR086W VPS35P34110 944 aa1.59□□□□□ -2.16
PRP16YKR086W YFL054CP43549 646 aa1.59□□□□□ -2.16
PRP16YKR086W TPP1Q03796 238 aa1.59□□□□□ -2.16
PRP16YKR086W HDA2Q06629 674 aa1.59□□□□□ -2.16
PRP16YKR086W LAP2Q10740 671 aa1.59□□□□□ -2.16
PRP16YKR086W PRP6P19735 899 aaPredicted RBP1.59□□□□□ -2.16
PRP16YKR086W CLN2P20438 545 aa1.59□□□□□ -2.16
PRP16YKR086W PEX28P38848 579 aa1.59□□□□□ -2.16
PRP16YKR086W KRI1P42846 591 aaKnown RBP1.59□□□□□ -2.16
PRP16YKR086W ADI1Q03677 179 aa1.59□□□□□ -2.16
PRP16YKR086W SSY1Q03770 852 aa1.59□□□□□ -2.16
PRP16YKR086W RSA3Q05942 220 aaKnown RBP1.59□□□□□ -2.16
PRP16YKR086W SPP382Q06411 708 aaPredicted RBP1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms