RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	SEC66	P33754	206 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	LHS1	P36016	881 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	SSB2	P40150	613 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	YML108W	Q03759	105 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	GIC2	Q06648	383 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	BUD7	Q08754	746 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	CHS5	Q12114	671 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	RRP36	Q12481	300 aa	Predicted RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	RPS3	P05750	240 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SPT23	YKL020C	CDC60	P26637	1090 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	ITR1	P30605	584 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	PTH2	P34222	208 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	MIA40	P36046	403 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	GRX7	P38068	203 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	PSY4	P38193	441 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	TIF5	P38431	405 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	DOT6	P40059	670 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	FMP10	P40098	244 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	RRP46	P53256	223 aa	Predicted RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	ASI1	P54074	624 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	RPN4	Q03465	531 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	VAM6	Q07468	1049 aa		4.26	□□□□□ -1.73
SPT23	YKL020C	UTP10	P42945	1769 aa	Known RBP	4.26	□□□□□ -1.73
SPT23	YKL020C	TRM1	P15565	570 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	DAL7	P21826	554 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	TRX2	P22803	104 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	ECM32	P32644	1121 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	BMH2	P34730	273 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	MRP8	P35719	219 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	SPT8	P38915	602 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	SAK1	P38990	1142 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	CAF130	P53280	1122 aa	Predicted RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	HEF3	P53978	1044 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	CEG1	Q01159	459 aa	Predicted RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	SVL3	Q03088	825 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	STE23	Q06010	1027 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	BRX1	Q08235	291 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	LSO2	Q3E772	92 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	TUF1	P02992	437 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	KRR1	P25586	316 aa	Predicted RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	RTG3	P38165	486 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	SRB7	P47822	140 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	COP1	P53622	1201 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	ADA2	Q02336	434 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	RAD33	Q04231	177 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	SFH1	Q06168	426 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	DPH6	Q12429	685 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	RNR2	P09938	399 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	OCA4	P25366	362 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	YSW1	P38280	609 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	VPS8	P39702	1274 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	GTT3	P39996	337 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	ESL1	P40456	1118 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	LSG1	P53145	640 aa	Known RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	NCS2	P53923	493 aa	Predicted RBP	4.25	□□□□□ -1.73
SPT23	YKL020C	SRC1	Q03707	834 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	FAR8	Q05040	523 aa		4.25	□□□□□ -1.73
SPT23	YKL020C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SPT23	YKL020C	TPM1	P17536	199 aa	Known RBP	4.24	□□□□□ -1.73
SPT23	YKL020C	DIT1	P21623	536 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	MBR1	P23493	339 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	AAD3	P25612	363 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	SET3	P36124	751 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	SET1	P38827	1080 aa	Known RBP	4.24	□□□□□ -1.73
SPT23	YKL020C	PHB1	P40961	287 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	ILM1	P47155	203 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	YGL242C	P53066	181 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	ZDS2	P54786	942 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	ULP1	Q02724	621 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	YMR018W	Q04364	514 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	NKP2	Q06162	153 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	SPN1	Q06505	410 aa	Predicted RBP	4.24	□□□□□ -1.73
SPT23	YKL020C	RSC3	Q06639	885 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	MET7	Q08645	548 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	YOR223W	Q12015	292 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	MCM16	Q12262	181 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	MAM3	Q12296	706 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	TAF3	Q12297	353 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	FOB1	O13329	566 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	ADH4	P10127	382 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SPT23	YKL020C	MCM3	P24279	971 aa	Known RBP	4.24	□□□□□ -1.73
SPT23	YKL020C	PDB1	P32473	366 aa	Known RBP	4.24	□□□□□ -1.73
SPT23	YKL020C	XRS2	P33301	854 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	PXA2	P34230	853 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	FUI1	P38196	639 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	RIM21	P48565	533 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	NUP84	P52891	726 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	DIP5	P53388	608 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	RCM1	P53972	490 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	IOC2	Q12072	812 aa		4.24	□□□□□ -1.73
SPT23	YKL020C	SSC1	P0CS90	654 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	FRS2	P15625	503 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	TUP1	P16649	713 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	CLB4	P24871	460 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	SLX5	P32828	619 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	SMY2	P32909	740 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	STE13	P33894	931 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	HXT13	P39924	564 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms