RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C TOM71P38825 639 aaKnown RBP2.44□□□□□ -2.02
UFD4YKL010C EFM4P40516 257 aa2.44□□□□□ -2.02
UFD4YKL010C IRC8P47046 822 aa2.44□□□□□ -2.02
UFD4YKL010C ENV11P53246 860 aa2.44□□□□□ -2.02
UFD4YKL010C RAD61Q99359 647 aa2.44□□□□□ -2.02
UFD4YKL010C MIC60P36112 540 aa2.44□□□□□ -2.02
UFD4YKL010C CIC1P38779 376 aaKnown RBP2.44□□□□□ -2.02
UFD4YKL010C MSH4P40965 878 aaPredicted RBP2.44□□□□□ -2.02
UFD4YKL010C RPL22BP56628 122 aaKnown RBP2.44□□□□□ -2.02
UFD4YKL010C GDE1Q02979 1223 aa2.44□□□□□ -2.02
UFD4YKL010C TFC6Q06339 672 aa2.44□□□□□ -2.02
UFD4YKL010C TDA5Q06417 326 aaKnown RBP2.44□□□□□ -2.02
UFD4YKL010C CUR1Q06469 252 aa2.44□□□□□ -2.02
UFD4YKL010C SNU66Q12420 587 aaPredicted RBP2.44□□□□□ -2.02
UFD4YKL010C DPH6Q12429 685 aa2.44□□□□□ -2.02
UFD4YKL010C MGM1P32266 881 aa2.43□□□□□ -2.02
UFD4YKL010C ANP1P32629 500 aa2.43□□□□□ -2.02
UFD4YKL010C RRM3P38766 723 aa2.43□□□□□ -2.02
UFD4YKL010C ACO2P39533 789 aa2.43□□□□□ -2.02
UFD4YKL010C WRS1Q12109 432 aaKnown RBP2.43□□□□□ -2.02
UFD4YKL010C QCR6P00127 147 aa2.43□□□□□ -2.02
UFD4YKL010C TRM1P15565 570 aaKnown RBP2.43□□□□□ -2.02
UFD4YKL010C KRE2P27809 442 aa2.43□□□□□ -2.02
UFD4YKL010C ERT1P38140 529 aa2.43□□□□□ -2.02
UFD4YKL010C MCX1P38323 520 aaPredicted RBP2.43□□□□□ -2.02
UFD4YKL010C RSC30P38781 883 aa2.43□□□□□ -2.02
UFD4YKL010C PCI8P40512 444 aa2.43□□□□□ -2.02
UFD4YKL010C YDL206WQ12424 762 aa2.43□□□□□ -2.02
UFD4YKL010C MAK31P23059 88 aa2.43□□□□□ -2.02
UFD4YKL010C LTV1P34078 463 aa2.43□□□□□ -2.02
UFD4YKL010C SET3P36124 751 aa2.43□□□□□ -2.02
UFD4YKL010C RFC5P38251 354 aa2.43□□□□□ -2.02
UFD4YKL010C FYV10P40492 516 aa2.43□□□□□ -2.02
UFD4YKL010C LYS14P40971 790 aa2.43□□□□□ -2.02
UFD4YKL010C ERG5P54781 538 aa2.43□□□□□ -2.02
UFD4YKL010C YOR296WQ08748 1289 aa2.43□□□□□ -2.02
UFD4YKL010C AIM7Q12156 149 aa2.43□□□□□ -2.02
UFD4YKL010C BUG1Q12191 341 aa2.43□□□□□ -2.02
UFD4YKL010C MAK16P10962 306 aaPredicted RBP2.42□□□□□ -2.02
UFD4YKL010C RPN10P38886 268 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C PXA1P41909 870 aa2.42□□□□□ -2.02
UFD4YKL010C SML1Q04964 104 aa2.42□□□□□ -2.02
UFD4YKL010C MMR1Q06324 491 aa2.42□□□□□ -2.02
UFD4YKL010C THI3Q07471 609 aa2.42□□□□□ -2.02
UFD4YKL010C ATG9Q12142 997 aa2.42□□□□□ -2.02
UFD4YKL010C TIP41Q12199 356 aa2.42□□□□□ -2.02
UFD4YKL010C MCM16Q12262 181 aa2.42□□□□□ -2.02
UFD4YKL010C MMP1Q12372 583 aa2.42□□□□□ -2.02
UFD4YKL010C CHO2P05374 869 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C GLN1P32288 370 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C DID4P36108 232 aa2.42□□□□□ -2.02
UFD4YKL010C SHM1P37292 490 aaPredicted RBP2.42□□□□□ -2.02
UFD4YKL010C NUP82P40368 713 aa2.42□□□□□ -2.02
UFD4YKL010C ALG2P43636 503 aa2.42□□□□□ -2.02
UFD4YKL010C MRS2Q01926 470 aa2.42□□□□□ -2.02
UFD4YKL010C NGL3Q03210 505 aa2.42□□□□□ -2.02
UFD4YKL010C YCG1Q06680 1035 aa2.42□□□□□ -2.02
UFD4YKL010C PGA3Q12746 312 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C TRS33Q99394 268 aa2.42□□□□□ -2.02
UFD4YKL010C MIP1P15801 1254 aa2.42□□□□□ -2.02
UFD4YKL010C PFK2P16862 959 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
UFD4YKL010C EST1P17214 699 aaPredicted RBP2.42□□□□□ -2.02
UFD4YKL010C ISY1P21374 235 aaPredicted RBP2.42□□□□□ -2.02
UFD4YKL010C ADE17P38009 592 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C MAL31P38156 614 aa2.42□□□□□ -2.02
UFD4YKL010C HUL4P40985 892 aa2.42□□□□□ -2.02
UFD4YKL010C YML119WQ03208 357 aa2.42□□□□□ -2.02
UFD4YKL010C VPS1P21576 704 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C GBP2P25555 427 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
UFD4YKL010C SRO9P25567 434 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C VAC17P25591 423 aa2.42□□□□□ -2.02
UFD4YKL010C GLY1P37303 387 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C AKR1P39010 764 aa2.42□□□□□ -2.02
UFD4YKL010C UTP7P40055 554 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C PTK2P47116 818 aaKnown RBP2.42□□□□□ -2.02
UFD4YKL010C TBF1Q02457 562 aa2.42□□□□□ -2.02
UFD4YKL010C TIM50Q02776 476 aa2.42□□□□□ -2.02
UFD4YKL010C VPS64Q03944 604 aa2.42□□□□□ -2.02
UFD4YKL010C CKI1P20485 582 aa2.41□□□□□ -2.02
UFD4YKL010C TPM2P40414 161 aa2.41□□□□□ -2.02
UFD4YKL010C BUD6P41697 788 aa2.41□□□□□ -2.02
UFD4YKL010C YFH7P43591 353 aa2.41□□□□□ -2.02
UFD4YKL010C NUP85P46673 744 aa2.41□□□□□ -2.02
UFD4YKL010C YGL082WP53155 381 aa2.41□□□□□ -2.02
UFD4YKL010C PUS2P53167 370 aa2.41□□□□□ -2.02
UFD4YKL010C TMA16Q08687 178 aa2.41□□□□□ -2.02
UFD4YKL010C NUR1Q12066 484 aa2.41□□□□□ -2.02
UFD4YKL010C DAS2Q12084 232 aa2.41□□□□□ -2.02
UFD4YKL010C MET6P05694 767 aaKnown RBP2.41□□□□□ -2.02
UFD4YKL010C BOI1P38041 980 aaKnown RBP2.41□□□□□ -2.02
UFD4YKL010C UBP5P39944 805 aa2.41□□□□□ -2.02
UFD4YKL010C VFA1P40080 203 aa2.41□□□□□ -2.02
UFD4YKL010C VTC2P43585 828 aa2.41□□□□□ -2.02
UFD4YKL010C BTN2P53286 410 aa2.41□□□□□ -2.02
UFD4YKL010C APP1P53933 587 aa2.41□□□□□ -2.02
UFD4YKL010C IRC4Q03036 179 aa2.41□□□□□ -2.02
UFD4YKL010C VPS38Q05919 439 aa2.41□□□□□ -2.02
UFD4YKL010C MLH2Q07980 695 aa2.41□□□□□ -2.02
UFD4YKL010C DSE3Q08729 430 aa2.41□□□□□ -2.02
UFD4YKL010C UBC1P21734 215 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms