RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
SCARNA2-201ENST00000458748 CCDC180Q9P1Z9 1646 aa38.46■■■■□ 3.75
SCARNA2-201ENST00000458748 ABCC9O60706 1549 aa38.13■■■■□ 3.69
SCARNA2-201ENST00000458748 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
SCARNA2-201ENST00000458748 NACADO15069 1562 aa36.24■■■■□ 3.39
SCARNA2-201ENST00000458748 DCAF8L2P0C7V8 631 aa36.02■■■■□ 3.36
SCARNA2-201ENST00000458748 MYO15BQ96JP2 1530 aa35.94■■■■□ 3.34
SCARNA2-201ENST00000458748 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
SCARNA2-201ENST00000458748 DNAJC5BQ9UF47 199 aa35.69■■■■□ 3.3
SCARNA2-201ENST00000458748 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
SCARNA2-201ENST00000458748 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
SCARNA2-201ENST00000458748 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
SCARNA2-201ENST00000458748 BICRAQ9NZM4 1560 aa35.24■■■■□ 3.23
SCARNA2-201ENST00000458748 SCRIBQ14160 1630 aa34.96■■■■□ 3.19
SCARNA2-201ENST00000458748 SHROOM4Q9ULL8 1493 aa34.92■■■■□ 3.18
SCARNA2-201ENST00000458748 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
SCARNA2-201ENST00000458748 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
SCARNA2-201ENST00000458748 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
SCARNA2-201ENST00000458748 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
SCARNA2-201ENST00000458748 NCAPD3P42695 1498 aa33.43■■■□□ 2.94
SCARNA2-201ENST00000458748 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
SCARNA2-201ENST00000458748 ATAD2BQ9ULI0 1458 aa33.36■■■□□ 2.93
SCARNA2-201ENST00000458748 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
SCARNA2-201ENST00000458748 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
SCARNA2-201ENST00000458748 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
SCARNA2-201ENST00000458748 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
SCARNA2-201ENST00000458748 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
SCARNA2-201ENST00000458748 ERCC6Q03468 1493 aa32.9■■■□□ 2.86
SCARNA2-201ENST00000458748 NESP48681 1621 aa32.79■■■□□ 2.84
SCARNA2-201ENST00000458748 CUX2O14529 1486 aa32.75■■■□□ 2.83
SCARNA2-201ENST00000458748 WIZO95785 1651 aa32.74■■■□□ 2.83
SCARNA2-201ENST00000458748 DNAJC5Q9H3Z4 198 aa32.65■■■□□ 2.82
SCARNA2-201ENST00000458748 LAMC3Q9Y6N6 1575 aa32.62■■■□□ 2.81
SCARNA2-201ENST00000458748 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
SCARNA2-201ENST00000458748 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
SCARNA2-201ENST00000458748 PDS5BQ9NTI5 1447 aa32.4■■■□□ 2.78
SCARNA2-201ENST00000458748 TOP2AP11388 1531 aaKnown RBP32.4■■■□□ 2.78
SCARNA2-201ENST00000458748 THOC2Q8NI27 1593 aaKnown RBP32.38■■■□□ 2.77
SCARNA2-201ENST00000458748 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
SCARNA2-201ENST00000458748 CFTRP13569 1480 aa32.15■■■□□ 2.74
SCARNA2-201ENST00000458748 MRC2Q9UBG0 1479 aa32.07■■■□□ 2.72
SCARNA2-201ENST00000458748 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
SCARNA2-201ENST00000458748 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
SCARNA2-201ENST00000458748 CCDC88BA6NC98 1476 aa32■■■□□ 2.71
SCARNA2-201ENST00000458748 WDR62O43379 1518 aa31.98■■■□□ 2.71
SCARNA2-201ENST00000458748 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
SCARNA2-201ENST00000458748 URB2Q14146 1524 aaKnown RBP31.71■■■□□ 2.67
SCARNA2-201ENST00000458748 ABCC8Q09428 1581 aa31.53■■■□□ 2.64
SCARNA2-201ENST00000458748 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
SCARNA2-201ENST00000458748 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
SCARNA2-201ENST00000458748 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
SCARNA2-201ENST00000458748 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
SCARNA2-201ENST00000458748 TRIM41Q8WV44 630 aa31.33■■■□□ 2.61
SCARNA2-201ENST00000458748 OSCARQ8IYS5 282 aa31.31■■■□□ 2.6
SCARNA2-201ENST00000458748 ZNF608Q9ULD9 1512 aaPredicted RBP31.29■■■□□ 2.6
SCARNA2-201ENST00000458748 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
SCARNA2-201ENST00000458748 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
SCARNA2-201ENST00000458748 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
SCARNA2-201ENST00000458748 CUX1P39880 1505 aa31.08■■■□□ 2.57
SCARNA2-201ENST00000458748 SOGA1O94964 1423 aa31.06■■■□□ 2.56
SCARNA2-201ENST00000458748 FGD5Q6ZNL6 1462 aa31.04■■■□□ 2.56
SCARNA2-201ENST00000458748 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.56
SCARNA2-201ENST00000458748 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
SCARNA2-201ENST00000458748 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
SCARNA2-201ENST00000458748 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
SCARNA2-201ENST00000458748 RIMBP3CA6NJZ7 1639 aa30.88■■■□□ 2.53
SCARNA2-201ENST00000458748 RIMBP3BA6NNM3 1639 aa30.88■■■□□ 2.53
SCARNA2-201ENST00000458748 RIMBP3Q9UFD9 1639 aa30.88■■■□□ 2.53
SCARNA2-201ENST00000458748 CHD1O14646 1710 aa30.83■■■□□ 2.53
SCARNA2-201ENST00000458748 FBLN2P98095 1184 aa30.82■■■□□ 2.52
SCARNA2-201ENST00000458748 ARHGEF11O15085 1522 aa30.81■■■□□ 2.52
SCARNA2-201ENST00000458748 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
SCARNA2-201ENST00000458748 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
SCARNA2-201ENST00000458748 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
SCARNA2-201ENST00000458748 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
SCARNA2-201ENST00000458748 GRIN2BQ13224 1484 aa30.75■■■□□ 2.51
SCARNA2-201ENST00000458748 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
SCARNA2-201ENST00000458748 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
SCARNA2-201ENST00000458748 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.5
SCARNA2-201ENST00000458748 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
SCARNA2-201ENST00000458748 PBRM1Q86U86 1689 aa30.67■■■□□ 2.5
SCARNA2-201ENST00000458748 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
SCARNA2-201ENST00000458748 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
SCARNA2-201ENST00000458748 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
SCARNA2-201ENST00000458748 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
SCARNA2-201ENST00000458748 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
SCARNA2-201ENST00000458748 CLASP1Q7Z460 1538 aa30.48■■■□□ 2.47
SCARNA2-201ENST00000458748 ERICH3Q5RHP9 1530 aa30.4■■■□□ 2.46
SCARNA2-201ENST00000458748 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
SCARNA2-201ENST00000458748 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
SCARNA2-201ENST00000458748 FHAD1B1AJZ9 1412 aa30.34■■■□□ 2.45
SCARNA2-201ENST00000458748 TRHP20396 242 aaPredicted RBP30.24■■■□□ 2.43
SCARNA2-201ENST00000458748 NUP160Q12769 1436 aa30.23■■■□□ 2.43
SCARNA2-201ENST00000458748 CEP170Q5SW79 1584 aa30.19■■■□□ 2.42
SCARNA2-201ENST00000458748 KIF27Q86VH2 1401 aa30.17■■■□□ 2.42
SCARNA2-201ENST00000458748 IGF1RP08069 1367 aa30.07■■■□□ 2.4
SCARNA2-201ENST00000458748 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
SCARNA2-201ENST00000458748 ERCC6L2Q5T890 1561 aa30.07■■■□□ 2.4
SCARNA2-201ENST00000458748 CUL7Q14999 1698 aa30.06■■■□□ 2.4
SCARNA2-201ENST00000458748 RUSC2Q8N2Y8 1516 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms