Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 IRX1P1-201ENST00000438849 1838 ntBASIC18.38■□□□□ 0.53
KRT78Q8N1N4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.37■□□□□ 0.53
KRT78Q8N1N4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 AC004951.3-201ENST00000418645 1148 ntBASIC18.37■□□□□ 0.53
KRT78Q8N1N4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.37■□□□□ 0.53
KRT78Q8N1N4 TSPY23P-201ENST00000440136 739 ntBASIC18.37■□□□□ 0.53
KRT78Q8N1N4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT78Q8N1N4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 RPS2P55-201ENST00000397318 883 ntBASIC18.36■□□□□ 0.53
KRT78Q8N1N4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 AC012618.2-201ENST00000428058 849 ntBASIC18.36■□□□□ 0.53
KRT78Q8N1N4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 AC107956.1-201ENST00000494359 873 ntBASIC18.36■□□□□ 0.53
KRT78Q8N1N4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.36■□□□□ 0.53
KRT78Q8N1N4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT78Q8N1N4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 RCC2P6-201ENST00000526625 1557 ntBASIC18.35■□□□□ 0.53
KRT78Q8N1N4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.35■□□□□ 0.53
KRT78Q8N1N4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 FAM197Y1-201ENST00000421178 764 ntBASIC18.35■□□□□ 0.53
KRT78Q8N1N4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 CD177P1-201ENST00000606252 935 ntBASIC18.35■□□□□ 0.53
KRT78Q8N1N4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 AP000974.1-201ENST00000623909 2387 ntBASIC18.35■□□□□ 0.53
KRT78Q8N1N4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT78Q8N1N4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 260.1 ms