RNA–Protein interactions for RNA: ENST00000409726.5

RAMP1-204, Transcript of receptor activity modifying protein 1, humanhuman

TSL 3 BASIC

Gene RAMP1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP1-204ENST00000409726 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
RAMP1-204ENST00000409726 CCDC180Q9P1Z9 1646 aa41.84■■■■■ 4.29
RAMP1-204ENST00000409726 ABCC9O60706 1549 aa41.08■■■■■ 4.17
RAMP1-204ENST00000409726 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
RAMP1-204ENST00000409726 DCAF8L2P0C7V8 631 aa39.44■■■■□ 3.9
RAMP1-204ENST00000409726 NACADO15069 1562 aa39.39■■■■□ 3.9
RAMP1-204ENST00000409726 ZCCHC6Q5VYS8 1495 aaKnown RBP39.08■■■■□ 3.85
RAMP1-204ENST00000409726 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
RAMP1-204ENST00000409726 DCAF1Q9Y4B6 1507 aa38.84■■■■□ 3.81
RAMP1-204ENST00000409726 UNC13AQ9UPW8 1703 aa38.47■■■■□ 3.75
RAMP1-204ENST00000409726 PABPN1Q86U42 306 aaKnown RBP eCLIP38.37■■■■□ 3.73
RAMP1-204ENST00000409726 SCRIBQ14160 1630 aa38.17■■■■□ 3.7
RAMP1-204ENST00000409726 BICRAQ9NZM4 1560 aa38.17■■■■□ 3.7
RAMP1-204ENST00000409726 SHROOM4Q9ULL8 1493 aa37.89■■■■□ 3.66
RAMP1-204ENST00000409726 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
RAMP1-204ENST00000409726 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
RAMP1-204ENST00000409726 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
RAMP1-204ENST00000409726 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
RAMP1-204ENST00000409726 SMARCA4P51532 1647 aa36.48■■■■□ 3.43
RAMP1-204ENST00000409726 BAZ1AQ9NRL2 1556 aaPredicted RBP36.46■■■■□ 3.43
RAMP1-204ENST00000409726 SMARCA2P51531 1590 aa36.32■■■■□ 3.41
RAMP1-204ENST00000409726 NCAPD3P42695 1498 aa36.31■■■■□ 3.4
RAMP1-204ENST00000409726 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
RAMP1-204ENST00000409726 MROH2BQ7Z745 1585 aa36.16■■■■□ 3.38
RAMP1-204ENST00000409726 HMGXB3Q12766 1538 aa36.14■■■■□ 3.38
RAMP1-204ENST00000409726 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
RAMP1-204ENST00000409726 BAZ1BQ9UIG0 1483 aaKnown RBP36.07■■■■□ 3.37
RAMP1-204ENST00000409726 WIZO95785 1651 aa35.77■■■■□ 3.32
RAMP1-204ENST00000409726 RSF1Q96T23 1441 aaPredicted RBP35.71■■■■□ 3.31
RAMP1-204ENST00000409726 ERCC6Q03468 1493 aa35.52■■■■□ 3.28
RAMP1-204ENST00000409726 NESP48681 1621 aa35.46■■■■□ 3.27
RAMP1-204ENST00000409726 TOP2AP11388 1531 aaKnown RBP35.43■■■■□ 3.26
RAMP1-204ENST00000409726 LAMC3Q9Y6N6 1575 aa35.42■■■■□ 3.26
RAMP1-204ENST00000409726 CADPSQ9ULU8 1353 aa35.28■■■■□ 3.24
RAMP1-204ENST00000409726 PDS5BQ9NTI5 1447 aa35.23■■■■□ 3.23
RAMP1-204ENST00000409726 CUX2O14529 1486 aa35.13■■■■□ 3.21
RAMP1-204ENST00000409726 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
RAMP1-204ENST00000409726 CFTRP13569 1480 aa35.01■■■■□ 3.19
RAMP1-204ENST00000409726 CCDC88BA6NC98 1476 aa34.98■■■■□ 3.19
RAMP1-204ENST00000409726 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
RAMP1-204ENST00000409726 FANCD2Q9BXW9 1451 aa34.89■■■■□ 3.18
RAMP1-204ENST00000409726 CEP164Q9UPV0 1460 aa34.89■■■■□ 3.18
RAMP1-204ENST00000409726 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
RAMP1-204ENST00000409726 SUPT5HO00267 1087 aaKnown RBP34.81■■■■□ 3.16
RAMP1-204ENST00000409726 PRDM2Q13029 1718 aa34.74■■■■□ 3.15
RAMP1-204ENST00000409726 WDR62O43379 1518 aa34.7■■■■□ 3.14
RAMP1-204ENST00000409726 URB2Q14146 1524 aaKnown RBP34.49■■■■□ 3.11
RAMP1-204ENST00000409726 ABCC8Q09428 1581 aa34.35■■■■□ 3.09
RAMP1-204ENST00000409726 TOPBP1Q92547 1522 aa34.29■■■■□ 3.08
RAMP1-204ENST00000409726 DNMBPQ6XZF7 1577 aa34.25■■■■□ 3.07
RAMP1-204ENST00000409726 DNAJC5Q9H3Z4 198 aa34.18■■■■□ 3.06
RAMP1-204ENST00000409726 IFT140Q96RY7 1462 aa34.15■■■■□ 3.06
RAMP1-204ENST00000409726 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
RAMP1-204ENST00000409726 CUX1P39880 1505 aa33.94■■■■□ 3.02
RAMP1-204ENST00000409726 ZNF608Q9ULD9 1512 aaPredicted RBP33.93■■■■□ 3.02
RAMP1-204ENST00000409726 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
RAMP1-204ENST00000409726 SOGA1O94964 1423 aa33.88■■■■□ 3.01
RAMP1-204ENST00000409726 TARBP1Q13395 1621 aaKnown RBP33.88■■■■□ 3.01
RAMP1-204ENST00000409726 EIF4G3O43432 1585 aaKnown RBP33.83■■■■□ 3.01
RAMP1-204ENST00000409726 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3.01
RAMP1-204ENST00000409726 AQRO60306 1485 aaKnown RBP eCLIP33.76■■■□□ 2.99
RAMP1-204ENST00000409726 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
RAMP1-204ENST00000409726 OSCARQ8IYS5 282 aa33.69■■■□□ 2.98
RAMP1-204ENST00000409726 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
RAMP1-204ENST00000409726 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
RAMP1-204ENST00000409726 TOP2BQ02880 1626 aa33.64■■■□□ 2.98
RAMP1-204ENST00000409726 BIVM-ERCC5R4GMW8 1640 aa33.63■■■□□ 2.97
RAMP1-204ENST00000409726 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
RAMP1-204ENST00000409726 ABCA10Q8WWZ4 1543 aa33.55■■■□□ 2.96
RAMP1-204ENST00000409726 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
RAMP1-204ENST00000409726 FBLN2P98095 1184 aa33.5■■■□□ 2.95
RAMP1-204ENST00000409726 GAPVD1Q14C86 1478 aa33.49■■■□□ 2.95
RAMP1-204ENST00000409726 SNAPC4Q5SXM2 1469 aa33.46■■■□□ 2.95
RAMP1-204ENST00000409726 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
RAMP1-204ENST00000409726 CHD1O14646 1710 aa33.42■■■□□ 2.94
RAMP1-204ENST00000409726 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
RAMP1-204ENST00000409726 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
RAMP1-204ENST00000409726 CHMP7Q8WUX9 453 aaPredicted RBP33.37■■■□□ 2.93
RAMP1-204ENST00000409726 SYNJ2O15056 1496 aa33.31■■■□□ 2.92
RAMP1-204ENST00000409726 ERICH3Q5RHP9 1530 aa33.17■■■□□ 2.9
RAMP1-204ENST00000409726 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
RAMP1-204ENST00000409726 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
RAMP1-204ENST00000409726 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
RAMP1-204ENST00000409726 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
RAMP1-204ENST00000409726 RIMBP3CA6NJZ7 1639 aa33.08■■■□□ 2.89
RAMP1-204ENST00000409726 RIMBP3BA6NNM3 1639 aa33.08■■■□□ 2.89
RAMP1-204ENST00000409726 RIMBP3Q9UFD9 1639 aa33.08■■■□□ 2.89
RAMP1-204ENST00000409726 ARHGEF11O15085 1522 aa33.07■■■□□ 2.89
RAMP1-204ENST00000409726 GRIN2AQ12879 1464 aa33.06■■■□□ 2.88
RAMP1-204ENST00000409726 CLASP1Q7Z460 1538 aa33.03■■■□□ 2.88
RAMP1-204ENST00000409726 NUP160Q12769 1436 aa32.88■■■□□ 2.85
RAMP1-204ENST00000409726 IGF1RP08069 1367 aa32.88■■■□□ 2.85
RAMP1-204ENST00000409726 CUL7Q14999 1698 aa32.86■■■□□ 2.85
RAMP1-204ENST00000409726 CEP170Q5SW79 1584 aa32.86■■■□□ 2.85
RAMP1-204ENST00000409726 CYB5RLQ6IPT4 315 aa32.83■■■□□ 2.85
RAMP1-204ENST00000409726 ARAP1Q96P48 1450 aa32.78■■■□□ 2.84
RAMP1-204ENST00000409726 CARMIL1Q5VZK9 1371 aa32.74■■■□□ 2.83
RAMP1-204ENST00000409726 SHROOM2Q13796 1616 aa32.63■■■□□ 2.81
RAMP1-204ENST00000409726 RUSC2Q8N2Y8 1516 aa32.63■■■□□ 2.81
RAMP1-204ENST00000409726 JPH4Q96JJ6 628 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms