RNA–Protein interactions for RNA: ENST00000392750.6

PDCD10-201, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-201ENST00000392750 NISCHQ9Y2I1 1504 aa41.62■■■■■ 4.25
PDCD10-201ENST00000392750 CCDC180Q9P1Z9 1646 aa35.81■■■■□ 3.32
PDCD10-201ENST00000392750 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
PDCD10-201ENST00000392750 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
PDCD10-201ENST00000392750 DCAF1Q9Y4B6 1507 aa34.32■■■■□ 3.08
PDCD10-201ENST00000392750 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
PDCD10-201ENST00000392750 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
PDCD10-201ENST00000392750 MYO15BQ96JP2 1530 aa33.61■■■□□ 2.97
PDCD10-201ENST00000392750 ABCC9O60706 1549 aa33.44■■■□□ 2.94
PDCD10-201ENST00000392750 NACADO15069 1562 aa33.23■■■□□ 2.91
PDCD10-201ENST00000392750 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
PDCD10-201ENST00000392750 RB1CC1Q8TDY2 1594 aa32.78■■■□□ 2.84
PDCD10-201ENST00000392750 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
PDCD10-201ENST00000392750 CHIC1Q5VXU3 224 aa32.6■■■□□ 2.81
PDCD10-201ENST00000392750 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
PDCD10-201ENST00000392750 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
PDCD10-201ENST00000392750 UNC13AQ9UPW8 1703 aa32.18■■■□□ 2.74
PDCD10-201ENST00000392750 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
PDCD10-201ENST00000392750 WIZO95785 1651 aa32.01■■■□□ 2.71
PDCD10-201ENST00000392750 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
PDCD10-201ENST00000392750 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
PDCD10-201ENST00000392750 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
PDCD10-201ENST00000392750 TOP2AP11388 1531 aaKnown RBP31.62■■■□□ 2.65
PDCD10-201ENST00000392750 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
PDCD10-201ENST00000392750 LOC105371045A0A1W2PR82 267 aa31.46■■■□□ 2.63
PDCD10-201ENST00000392750 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
PDCD10-201ENST00000392750 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
PDCD10-201ENST00000392750 SMARCA2P51531 1590 aa31.38■■■□□ 2.61
PDCD10-201ENST00000392750 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
PDCD10-201ENST00000392750 ATAD2BQ9ULI0 1458 aa31.16■■■□□ 2.58
PDCD10-201ENST00000392750 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
PDCD10-201ENST00000392750 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
PDCD10-201ENST00000392750 ABCC8Q09428 1581 aa30.99■■■□□ 2.55
PDCD10-201ENST00000392750 PCGF6Q9BYE7 350 aa30.74■■■□□ 2.51
PDCD10-201ENST00000392750 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
PDCD10-201ENST00000392750 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.51
PDCD10-201ENST00000392750 HMGXB3Q12766 1538 aa30.7■■■□□ 2.5
PDCD10-201ENST00000392750 WRNQ14191 1432 aaPredicted RBP eCLIP30.65■■■□□ 2.5
PDCD10-201ENST00000392750 SOGA1O94964 1423 aa30.6■■■□□ 2.49
PDCD10-201ENST00000392750 EEA1Q15075 1411 aa30.52■■■□□ 2.48
PDCD10-201ENST00000392750 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
PDCD10-201ENST00000392750 TRIM26Q12899 539 aaPredicted RBP30.48■■■□□ 2.47
PDCD10-201ENST00000392750 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
PDCD10-201ENST00000392750 HRCP23327 699 aa30.42■■■□□ 2.46
PDCD10-201ENST00000392750 CSRNP3Q8WYN3 585 aa30.4■■■□□ 2.46
PDCD10-201ENST00000392750 TOP2BQ02880 1626 aa30.27■■■□□ 2.44
PDCD10-201ENST00000392750 CFTRP13569 1480 aa30.27■■■□□ 2.44
PDCD10-201ENST00000392750 TNIKQ9UKE5 1360 aa30.26■■■□□ 2.43
PDCD10-201ENST00000392750 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
PDCD10-201ENST00000392750 BIVM-ERCC5R4GMW8 1640 aa30.21■■■□□ 2.43
PDCD10-201ENST00000392750 GOLGA3Q08378 1498 aa30.18■■■□□ 2.42
PDCD10-201ENST00000392750 CEP162Q5TB80 1403 aa30.18■■■□□ 2.42
PDCD10-201ENST00000392750 CEP164Q9UPV0 1460 aa30.11■■■□□ 2.41
PDCD10-201ENST00000392750 KIF21BO75037 1637 aa30.1■■■□□ 2.41
PDCD10-201ENST00000392750 UBTFP17480 764 aaKnown RBP30.1■■■□□ 2.41
PDCD10-201ENST00000392750 CUX1P39880 1505 aa30.09■■■□□ 2.41
PDCD10-201ENST00000392750 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
PDCD10-201ENST00000392750 PRDM2Q13029 1718 aa30.01■■■□□ 2.39
PDCD10-201ENST00000392750 PPARGC1BQ86YN6 1023 aaKnown RBP29.96■■■□□ 2.39
PDCD10-201ENST00000392750 RAPGEF2Q9Y4G8 1499 aa29.9■■■□□ 2.38
PDCD10-201ENST00000392750 PRXQ9BXM0 1461 aa29.8■■■□□ 2.36
PDCD10-201ENST00000392750 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
PDCD10-201ENST00000392750 CLIP1P30622 1438 aa29.77■■■□□ 2.36
PDCD10-201ENST00000392750 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.35
PDCD10-201ENST00000392750 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.35
PDCD10-201ENST00000392750 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
PDCD10-201ENST00000392750 NESP48681 1621 aa29.62■■■□□ 2.33
PDCD10-201ENST00000392750 CUX2O14529 1486 aa29.6■■■□□ 2.33
PDCD10-201ENST00000392750 VPS8Q8N3P4 1428 aa29.59■■■□□ 2.33
PDCD10-201ENST00000392750 ZEB1P37275 1124 aaPredicted RBP29.56■■■□□ 2.32
PDCD10-201ENST00000392750 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
PDCD10-201ENST00000392750 IGF1RP08069 1367 aa29.52■■■□□ 2.32
PDCD10-201ENST00000392750 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
PDCD10-201ENST00000392750 LAMC3Q9Y6N6 1575 aa29.51■■■□□ 2.31
PDCD10-201ENST00000392750 RANGAP1P46060 587 aaPredicted RBP29.49■■■□□ 2.31
PDCD10-201ENST00000392750 TOPBP1Q92547 1522 aa29.46■■■□□ 2.31
PDCD10-201ENST00000392750 DNAJC5BQ9UF47 199 aa29.45■■■□□ 2.31
PDCD10-201ENST00000392750 ARAP1Q96P48 1450 aa29.41■■■□□ 2.3
PDCD10-201ENST00000392750 POLA1P09884 1462 aaPredicted RBP29.38■■■□□ 2.29
PDCD10-201ENST00000392750 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
PDCD10-201ENST00000392750 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
PDCD10-201ENST00000392750 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
PDCD10-201ENST00000392750 URB2Q14146 1524 aaKnown RBP29.32■■■□□ 2.28
PDCD10-201ENST00000392750 APLP2Q06481 763 aa29.3■■■□□ 2.28
PDCD10-201ENST00000392750 PDS5BQ9NTI5 1447 aa29.3■■■□□ 2.28
PDCD10-201ENST00000392750 ARHGAP35Q9NRY4 1499 aa29.26■■■□□ 2.27
PDCD10-201ENST00000392750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.26■■■□□ 2.27
PDCD10-201ENST00000392750 CCER1Q8TC90 406 aaPredicted RBP29.17■■■□□ 2.26
PDCD10-201ENST00000392750 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
PDCD10-201ENST00000392750 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
PDCD10-201ENST00000392750 CUL7Q14999 1698 aa29.08■■■□□ 2.25
PDCD10-201ENST00000392750 KANK4Q5T7N3 995 aaPredicted RBP29.05■■■□□ 2.24
PDCD10-201ENST00000392750 ABCA5Q8WWZ7 1642 aa29.03■■■□□ 2.24
PDCD10-201ENST00000392750 TDRD9Q8NDG6 1382 aaKnown RBP29.02■■■□□ 2.24
PDCD10-201ENST00000392750 HNRNPUL2Q1KMD3 747 aaKnown RBP28.98■■■□□ 2.23
PDCD10-201ENST00000392750 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
PDCD10-201ENST00000392750 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
PDCD10-201ENST00000392750 MRC2Q9UBG0 1479 aa28.9■■■□□ 2.22
PDCD10-201ENST00000392750 MAP3K1Q13233 1512 aa28.88■■■□□ 2.21
PDCD10-201ENST00000392750 CTTNBP2Q8WZ74 1663 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms