RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 NISCHQ9Y2I1 1504 aa47.09■■■■■ 5.13
CDKN1B-202ENST00000396340 CCDC180Q9P1Z9 1646 aa42.14■■■■■ 4.34
CDKN1B-202ENST00000396340 ABCC9O60706 1549 aa41.12■■■■■ 4.17
CDKN1B-202ENST00000396340 RB1CC1Q8TDY2 1594 aa39.73■■■■□ 3.95
CDKN1B-202ENST00000396340 NACADO15069 1562 aa39.65■■■■□ 3.94
CDKN1B-202ENST00000396340 MYO15BQ96JP2 1530 aa39.42■■■■□ 3.9
CDKN1B-202ENST00000396340 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
CDKN1B-202ENST00000396340 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
CDKN1B-202ENST00000396340 DCAF1Q9Y4B6 1507 aa39.11■■■■□ 3.85
CDKN1B-202ENST00000396340 UNC13AQ9UPW8 1703 aa38.71■■■■□ 3.79
CDKN1B-202ENST00000396340 BICRAQ9NZM4 1560 aa38.31■■■■□ 3.72
CDKN1B-202ENST00000396340 PABPN1Q86U42 306 aaKnown RBP eCLIP38.31■■■■□ 3.72
CDKN1B-202ENST00000396340 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
CDKN1B-202ENST00000396340 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
CDKN1B-202ENST00000396340 DNAJC5BQ9UF47 199 aa37.76■■■■□ 3.64
CDKN1B-202ENST00000396340 EIF4G1Q04637 1599 aaKnown RBP37.42■■■■□ 3.58
CDKN1B-202ENST00000396340 CC2D2AQ9P2K1 1620 aa37.29■■■■□ 3.56
CDKN1B-202ENST00000396340 CECR2Q9BXF3 1484 aa37.07■■■■□ 3.53
CDKN1B-202ENST00000396340 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
CDKN1B-202ENST00000396340 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
CDKN1B-202ENST00000396340 SMARCA2P51531 1590 aa36.52■■■■□ 3.44
CDKN1B-202ENST00000396340 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
CDKN1B-202ENST00000396340 ATAD2BQ9ULI0 1458 aa36.4■■■■□ 3.42
CDKN1B-202ENST00000396340 HMGXB3Q12766 1538 aa36.35■■■■□ 3.41
CDKN1B-202ENST00000396340 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
CDKN1B-202ENST00000396340 BAZ1BQ9UIG0 1483 aaKnown RBP36.17■■■■□ 3.38
CDKN1B-202ENST00000396340 MROH2BQ7Z745 1585 aa36.16■■■■□ 3.38
CDKN1B-202ENST00000396340 WIZO95785 1651 aa35.79■■■■□ 3.32
CDKN1B-202ENST00000396340 RSF1Q96T23 1441 aaPredicted RBP35.72■■■■□ 3.31
CDKN1B-202ENST00000396340 LAMC3Q9Y6N6 1575 aa35.66■■■■□ 3.3
CDKN1B-202ENST00000396340 ERCC6Q03468 1493 aa35.63■■■■□ 3.29
CDKN1B-202ENST00000396340 TOP2AP11388 1531 aaKnown RBP35.5■■■■□ 3.27
CDKN1B-202ENST00000396340 NESP48681 1621 aa35.46■■■■□ 3.27
CDKN1B-202ENST00000396340 PDS5BQ9NTI5 1447 aa35.42■■■■□ 3.26
CDKN1B-202ENST00000396340 CUX2O14529 1486 aa35.41■■■■□ 3.26
CDKN1B-202ENST00000396340 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
CDKN1B-202ENST00000396340 KIF21AQ7Z4S6 1674 aa35.19■■■■□ 3.22
CDKN1B-202ENST00000396340 CFTRP13569 1480 aa35.15■■■■□ 3.22
CDKN1B-202ENST00000396340 THOC2Q8NI27 1593 aaKnown RBP35.12■■■■□ 3.21
CDKN1B-202ENST00000396340 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
CDKN1B-202ENST00000396340 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
CDKN1B-202ENST00000396340 CCDC88BA6NC98 1476 aa34.99■■■■□ 3.19
CDKN1B-202ENST00000396340 MRC2Q9UBG0 1479 aa34.97■■■■□ 3.19
CDKN1B-202ENST00000396340 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
CDKN1B-202ENST00000396340 WDR62O43379 1518 aa34.86■■■■□ 3.17
CDKN1B-202ENST00000396340 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
CDKN1B-202ENST00000396340 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.12
CDKN1B-202ENST00000396340 URB2Q14146 1524 aaKnown RBP34.54■■■■□ 3.12
CDKN1B-202ENST00000396340 DNAJC5Q9H3Z4 198 aa34.46■■■■□ 3.11
CDKN1B-202ENST00000396340 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
CDKN1B-202ENST00000396340 TOPBP1Q92547 1522 aa34.36■■■■□ 3.09
CDKN1B-202ENST00000396340 IFT140Q96RY7 1462 aa34.3■■■■□ 3.08
CDKN1B-202ENST00000396340 POLA1P09884 1462 aaPredicted RBP34.04■■■■□ 3.04
CDKN1B-202ENST00000396340 TARBP1Q13395 1621 aaKnown RBP34.01■■■■□ 3.04
CDKN1B-202ENST00000396340 WDR97A6NE52 1622 aa34.01■■■■□ 3.03
CDKN1B-202ENST00000396340 CUX1P39880 1505 aa33.96■■■■□ 3.03
CDKN1B-202ENST00000396340 SOGA1O94964 1423 aa33.95■■■■□ 3.02
CDKN1B-202ENST00000396340 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
CDKN1B-202ENST00000396340 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
CDKN1B-202ENST00000396340 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
CDKN1B-202ENST00000396340 OSCARQ8IYS5 282 aa33.88■■■■□ 3.01
CDKN1B-202ENST00000396340 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
CDKN1B-202ENST00000396340 WRNQ14191 1432 aaPredicted RBP eCLIP33.77■■■■□ 3
CDKN1B-202ENST00000396340 AQRO60306 1485 aaKnown RBP eCLIP33.76■■■■□ 36e-9■■■■■ 35.5
CDKN1B-202ENST00000396340 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
CDKN1B-202ENST00000396340 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
CDKN1B-202ENST00000396340 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
CDKN1B-202ENST00000396340 ABCA10Q8WWZ4 1543 aa33.66■■■□□ 2.98
CDKN1B-202ENST00000396340 GRIN2BQ13224 1484 aa33.63■■■□□ 2.97
CDKN1B-202ENST00000396340 MAGI1Q96QZ7 1491 aaPredicted RBP33.62■■■□□ 2.97
CDKN1B-202ENST00000396340 GAPVD1Q14C86 1478 aa33.57■■■□□ 2.97
CDKN1B-202ENST00000396340 SYNJ1O43426 1573 aa33.57■■■□□ 2.96
CDKN1B-202ENST00000396340 CHD1O14646 1710 aa33.56■■■□□ 2.96
CDKN1B-202ENST00000396340 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
CDKN1B-202ENST00000396340 ABCA5Q8WWZ7 1642 aa33.52■■■□□ 2.96
CDKN1B-202ENST00000396340 SNAPC4Q5SXM2 1469 aa33.5■■■□□ 2.95
CDKN1B-202ENST00000396340 FBLN2P98095 1184 aa33.46■■■□□ 2.95
CDKN1B-202ENST00000396340 CHMP7Q8WUX9 453 aaPredicted RBP33.44■■■□□ 2.94
CDKN1B-202ENST00000396340 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
CDKN1B-202ENST00000396340 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
CDKN1B-202ENST00000396340 RIMBP3CA6NJZ7 1639 aa33.24■■■□□ 2.91
CDKN1B-202ENST00000396340 RIMBP3BA6NNM3 1639 aa33.24■■■□□ 2.91
CDKN1B-202ENST00000396340 RIMBP3Q9UFD9 1639 aa33.24■■■□□ 2.91
CDKN1B-202ENST00000396340 ARHGEF11O15085 1522 aa33.22■■■□□ 2.91
CDKN1B-202ENST00000396340 FHAD1B1AJZ9 1412 aa33.21■■■□□ 2.91
CDKN1B-202ENST00000396340 ADAMTS12P58397 1594 aa33.2■■■□□ 2.91
CDKN1B-202ENST00000396340 CLASP1Q7Z460 1538 aa33.18■■■□□ 2.9
CDKN1B-202ENST00000396340 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
CDKN1B-202ENST00000396340 KIF27Q86VH2 1401 aa33.15■■■□□ 2.9
CDKN1B-202ENST00000396340 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
CDKN1B-202ENST00000396340 CUL7Q14999 1698 aa33.03■■■□□ 2.88
CDKN1B-202ENST00000396340 NUP160Q12769 1436 aa33.01■■■□□ 2.87
CDKN1B-202ENST00000396340 IGF1RP08069 1367 aa32.91■■■□□ 2.86
CDKN1B-202ENST00000396340 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
CDKN1B-202ENST00000396340 CYB5RLQ6IPT4 315 aa32.89■■■□□ 2.86
CDKN1B-202ENST00000396340 ARAP1Q96P48 1450 aa32.86■■■□□ 2.85
CDKN1B-202ENST00000396340 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
CDKN1B-202ENST00000396340 CARMIL1Q5VZK9 1371 aa32.77■■■□□ 2.84
CDKN1B-202ENST00000396340 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
CDKN1B-202ENST00000396340 KIAA0586Q9BVV6 1533 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms