RNA–Protein interactions for RNA: ENST00000461599.1

UBQLN4P1-201, Transcript of ubiquilin 4 pseudogene 1, humanhuman

BASIC

Gene UBQLN4P1, Length 1,801 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4P1-201ENST00000461599 NISCHQ9Y2I1 1504 aa43.44■■■■■ 4.54
UBQLN4P1-201ENST00000461599 CCDC180Q9P1Z9 1646 aa37.96■■■■□ 3.67
UBQLN4P1-201ENST00000461599 ZCCHC6Q5VYS8 1495 aaKnown RBP36.46■■■■□ 3.43
UBQLN4P1-201ENST00000461599 DCAF1Q9Y4B6 1507 aa35.95■■■■□ 3.35
UBQLN4P1-201ENST00000461599 ABCC9O60706 1549 aa35.93■■■■□ 3.34
UBQLN4P1-201ENST00000461599 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
UBQLN4P1-201ENST00000461599 MYO15BQ96JP2 1530 aa35.57■■■■□ 3.28
UBQLN4P1-201ENST00000461599 NACADO15069 1562 aa35.38■■■■□ 3.25
UBQLN4P1-201ENST00000461599 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
UBQLN4P1-201ENST00000461599 RB1CC1Q8TDY2 1594 aa35.09■■■■□ 3.21
UBQLN4P1-201ENST00000461599 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
UBQLN4P1-201ENST00000461599 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
UBQLN4P1-201ENST00000461599 BICRAQ9NZM4 1560 aa34.01■■■■□ 3.04
UBQLN4P1-201ENST00000461599 SUPT5HO00267 1087 aaKnown RBP33.94■■■■□ 3.02
UBQLN4P1-201ENST00000461599 PABPN1Q86U42 306 aaKnown RBP eCLIP33.86■■■■□ 3.01
UBQLN4P1-201ENST00000461599 CECR2Q9BXF3 1484 aa33.73■■■□□ 2.99
UBQLN4P1-201ENST00000461599 RSF1Q96T23 1441 aaPredicted RBP33.64■■■□□ 2.98
UBQLN4P1-201ENST00000461599 BAZ1AQ9NRL2 1556 aaPredicted RBP33.57■■■□□ 2.96
UBQLN4P1-201ENST00000461599 MROH2BQ7Z745 1585 aa33.54■■■□□ 2.96
UBQLN4P1-201ENST00000461599 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
UBQLN4P1-201ENST00000461599 WIZO95785 1651 aa33.27■■■□□ 2.92
UBQLN4P1-201ENST00000461599 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
UBQLN4P1-201ENST00000461599 EIF4G1Q04637 1599 aaKnown RBP32.99■■■□□ 2.87
UBQLN4P1-201ENST00000461599 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
UBQLN4P1-201ENST00000461599 ATAD2BQ9ULI0 1458 aa32.89■■■□□ 2.86
UBQLN4P1-201ENST00000461599 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
UBQLN4P1-201ENST00000461599 BAZ1BQ9UIG0 1483 aaKnown RBP32.7■■■□□ 2.82
UBQLN4P1-201ENST00000461599 NCAPD3P42695 1498 aa32.64■■■□□ 2.82
UBQLN4P1-201ENST00000461599 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
UBQLN4P1-201ENST00000461599 CCDC88BA6NC98 1476 aa32.59■■■□□ 2.81
UBQLN4P1-201ENST00000461599 CC2D2AQ9P2K1 1620 aa32.53■■■□□ 2.8
UBQLN4P1-201ENST00000461599 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
UBQLN4P1-201ENST00000461599 TRIM41Q8WV44 630 aa31.95■■■□□ 2.7
UBQLN4P1-201ENST00000461599 CFTRP13569 1480 aa31.87■■■□□ 2.69
UBQLN4P1-201ENST00000461599 ABCC8Q09428 1581 aa31.84■■■□□ 2.69
UBQLN4P1-201ENST00000461599 CADPSQ9ULU8 1353 aa31.79■■■□□ 2.68
UBQLN4P1-201ENST00000461599 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
UBQLN4P1-201ENST00000461599 PRDM2Q13029 1718 aa31.74■■■□□ 2.67
UBQLN4P1-201ENST00000461599 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.66
UBQLN4P1-201ENST00000461599 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
UBQLN4P1-201ENST00000461599 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
UBQLN4P1-201ENST00000461599 NESP48681 1621 aa31.51■■■□□ 2.63
UBQLN4P1-201ENST00000461599 TOP2BQ02880 1626 aa31.45■■■□□ 2.62
UBQLN4P1-201ENST00000461599 FANCD2Q9BXW9 1451 aa31.43■■■□□ 2.62
UBQLN4P1-201ENST00000461599 BIVM-ERCC5R4GMW8 1640 aa31.43■■■□□ 2.62
UBQLN4P1-201ENST00000461599 CUX1P39880 1505 aa31.37■■■□□ 2.61
UBQLN4P1-201ENST00000461599 FAM9AQ8IZU1 332 aaPredicted RBP31.32■■■□□ 2.6
UBQLN4P1-201ENST00000461599 PDS5BQ9NTI5 1447 aa31.31■■■□□ 2.6
UBQLN4P1-201ENST00000461599 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
UBQLN4P1-201ENST00000461599 SOGA1O94964 1423 aa31.22■■■□□ 2.59
UBQLN4P1-201ENST00000461599 EEA1Q15075 1411 aa31.21■■■□□ 2.59
UBQLN4P1-201ENST00000461599 LOC105371045A0A1W2PR82 267 aa31.19■■■□□ 2.58
UBQLN4P1-201ENST00000461599 KIF21AQ7Z4S6 1674 aa31.16■■■□□ 2.58
UBQLN4P1-201ENST00000461599 DNMBPQ6XZF7 1577 aa31.14■■■□□ 2.58
UBQLN4P1-201ENST00000461599 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
UBQLN4P1-201ENST00000461599 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
UBQLN4P1-201ENST00000461599 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
UBQLN4P1-201ENST00000461599 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
UBQLN4P1-201ENST00000461599 CSRNP3Q8WYN3 585 aa31.03■■■□□ 2.56
UBQLN4P1-201ENST00000461599 POLA1P09884 1462 aaPredicted RBP30.91■■■□□ 2.54
UBQLN4P1-201ENST00000461599 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
UBQLN4P1-201ENST00000461599 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
UBQLN4P1-201ENST00000461599 EHMT2Q96KQ7 1210 aa30.84■■■□□ 2.53
UBQLN4P1-201ENST00000461599 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
UBQLN4P1-201ENST00000461599 CUX2O14529 1486 aa30.83■■■□□ 2.53
UBQLN4P1-201ENST00000461599 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
UBQLN4P1-201ENST00000461599 KIF21BO75037 1637 aa30.79■■■□□ 2.52
UBQLN4P1-201ENST00000461599 ABCA10Q8WWZ4 1543 aa30.79■■■□□ 2.52
UBQLN4P1-201ENST00000461599 GOLGA3Q08378 1498 aa30.74■■■□□ 2.51
UBQLN4P1-201ENST00000461599 WDR62O43379 1518 aa30.74■■■□□ 2.51
UBQLN4P1-201ENST00000461599 WDR97A6NE52 1622 aa30.7■■■□□ 2.5
UBQLN4P1-201ENST00000461599 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
UBQLN4P1-201ENST00000461599 PRXQ9BXM0 1461 aa30.66■■■□□ 2.5
UBQLN4P1-201ENST00000461599 TNIKQ9UKE5 1360 aa30.64■■■□□ 2.49
UBQLN4P1-201ENST00000461599 TARBP1Q13395 1621 aaKnown RBP30.63■■■□□ 2.49
UBQLN4P1-201ENST00000461599 IGF1RP08069 1367 aa30.63■■■□□ 2.49
UBQLN4P1-201ENST00000461599 UBTFP17480 764 aaKnown RBP30.61■■■□□ 2.49
UBQLN4P1-201ENST00000461599 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
UBQLN4P1-201ENST00000461599 RAPGEF2Q9Y4G8 1499 aa30.6■■■□□ 2.49
UBQLN4P1-201ENST00000461599 ABCA5Q8WWZ7 1642 aa30.54■■■□□ 2.48
UBQLN4P1-201ENST00000461599 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
UBQLN4P1-201ENST00000461599 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.48
UBQLN4P1-201ENST00000461599 GAPVD1Q14C86 1478 aa30.48■■■□□ 2.47
UBQLN4P1-201ENST00000461599 CARMIL1Q5VZK9 1371 aa30.48■■■□□ 2.47
UBQLN4P1-201ENST00000461599 CEP162Q5TB80 1403 aa30.44■■■□□ 2.46
UBQLN4P1-201ENST00000461599 CUL7Q14999 1698 aa30.43■■■□□ 2.46
UBQLN4P1-201ENST00000461599 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.45
UBQLN4P1-201ENST00000461599 PBRM1Q86U86 1689 aa30.33■■■□□ 2.45
UBQLN4P1-201ENST00000461599 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
UBQLN4P1-201ENST00000461599 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
UBQLN4P1-201ENST00000461599 CLIP1P30622 1438 aa30.24■■■□□ 2.43
UBQLN4P1-201ENST00000461599 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
UBQLN4P1-201ENST00000461599 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
UBQLN4P1-201ENST00000461599 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
UBQLN4P1-201ENST00000461599 RANGAP1P46060 587 aaPredicted RBP30.09■■■□□ 2.41
UBQLN4P1-201ENST00000461599 CTTNBP2Q8WZ74 1663 aa30.07■■■□□ 2.4
UBQLN4P1-201ENST00000461599 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
UBQLN4P1-201ENST00000461599 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
UBQLN4P1-201ENST00000461599 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
UBQLN4P1-201ENST00000461599 VPS8Q8N3P4 1428 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms