RNA–Protein interactions for RNA: ENST00000548100.1

ZFC3H1-206, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 1 (best) BASIC

Gene ZFC3H1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-206ENST00000548100 NISCHQ9Y2I1 1504 aa44.63■■■■■ 4.73
ZFC3H1-206ENST00000548100 CCDC180Q9P1Z9 1646 aa39.19■■■■□ 3.86
ZFC3H1-206ENST00000548100 ABCC9O60706 1549 aa37.57■■■■□ 3.6
ZFC3H1-206ENST00000548100 ZCCHC6Q5VYS8 1495 aaKnown RBP37.35■■■■□ 3.57
ZFC3H1-206ENST00000548100 DCAF8L2P0C7V8 631 aa37■■■■□ 3.51
ZFC3H1-206ENST00000548100 DCAF1Q9Y4B6 1507 aa36.97■■■■□ 3.51
ZFC3H1-206ENST00000548100 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
ZFC3H1-206ENST00000548100 NACADO15069 1562 aa36.7■■■■□ 3.47
ZFC3H1-206ENST00000548100 RB1CC1Q8TDY2 1594 aa36.51■■■■□ 3.43
ZFC3H1-206ENST00000548100 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
ZFC3H1-206ENST00000548100 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
ZFC3H1-206ENST00000548100 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
ZFC3H1-206ENST00000548100 BICRAQ9NZM4 1560 aa35.37■■■■□ 3.25
ZFC3H1-206ENST00000548100 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
ZFC3H1-206ENST00000548100 CECR2Q9BXF3 1484 aa34.68■■■■□ 3.14
ZFC3H1-206ENST00000548100 BAZ1AQ9NRL2 1556 aaPredicted RBP34.51■■■■□ 3.12
ZFC3H1-206ENST00000548100 MROH2BQ7Z745 1585 aa34.41■■■■□ 3.1
ZFC3H1-206ENST00000548100 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
ZFC3H1-206ENST00000548100 RSF1Q96T23 1441 aaPredicted RBP34.38■■■■□ 3.09
ZFC3H1-206ENST00000548100 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
ZFC3H1-206ENST00000548100 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
ZFC3H1-206ENST00000548100 PEG3Q9GZU2 1588 aa34.07■■■■□ 3.04
ZFC3H1-206ENST00000548100 WIZO95785 1651 aa34.04■■■■□ 3.04
ZFC3H1-206ENST00000548100 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
ZFC3H1-206ENST00000548100 SMARCA2P51531 1590 aa34.01■■■■□ 3.04
ZFC3H1-206ENST00000548100 CC2D2AQ9P2K1 1620 aa34■■■■□ 3.03
ZFC3H1-206ENST00000548100 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
ZFC3H1-206ENST00000548100 BAZ1BQ9UIG0 1483 aaKnown RBP33.79■■■■□ 3
ZFC3H1-206ENST00000548100 HMGXB3Q12766 1538 aa33.76■■■□□ 2.99
ZFC3H1-206ENST00000548100 TOP2AP11388 1531 aaKnown RBP33.75■■■□□ 2.99
ZFC3H1-206ENST00000548100 DNAJC5BQ9UF47 199 aa33.73■■■□□ 2.99
ZFC3H1-206ENST00000548100 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
ZFC3H1-206ENST00000548100 CADPSQ9ULU8 1353 aa32.98■■■□□ 2.87
ZFC3H1-206ENST00000548100 CFTRP13569 1480 aa32.95■■■□□ 2.86
ZFC3H1-206ENST00000548100 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
ZFC3H1-206ENST00000548100 NESP48681 1621 aa32.77■■■□□ 2.84
ZFC3H1-206ENST00000548100 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
ZFC3H1-206ENST00000548100 PDS5BQ9NTI5 1447 aa32.61■■■□□ 2.81
ZFC3H1-206ENST00000548100 FANCD2Q9BXW9 1451 aa32.56■■■□□ 2.8
ZFC3H1-206ENST00000548100 CHIC1Q5VXU3 224 aa32.47■■■□□ 2.79
ZFC3H1-206ENST00000548100 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
ZFC3H1-206ENST00000548100 ABCC8Q09428 1581 aa32.41■■■□□ 2.78
ZFC3H1-206ENST00000548100 WRNQ14191 1432 aaPredicted RBP eCLIP32.37■■■□□ 2.77
ZFC3H1-206ENST00000548100 KIF21AQ7Z4S6 1674 aa32.34■■■□□ 2.77
ZFC3H1-206ENST00000548100 ERCC6Q03468 1493 aa32.31■■■□□ 2.76
ZFC3H1-206ENST00000548100 TRIM41Q8WV44 630 aa32.29■■■□□ 2.76
ZFC3H1-206ENST00000548100 CUX1P39880 1505 aa32.21■■■□□ 2.75
ZFC3H1-206ENST00000548100 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
ZFC3H1-206ENST00000548100 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
ZFC3H1-206ENST00000548100 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
ZFC3H1-206ENST00000548100 TOP2BQ02880 1626 aa32.16■■■□□ 2.74
ZFC3H1-206ENST00000548100 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
ZFC3H1-206ENST00000548100 TOPBP1Q92547 1522 aa32.12■■■□□ 2.73
ZFC3H1-206ENST00000548100 BIVM-ERCC5R4GMW8 1640 aa32.12■■■□□ 2.73
ZFC3H1-206ENST00000548100 WDR62O43379 1518 aa32.03■■■□□ 2.72
ZFC3H1-206ENST00000548100 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
ZFC3H1-206ENST00000548100 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
ZFC3H1-206ENST00000548100 POLA1P09884 1462 aaPredicted RBP31.92■■■□□ 2.7
ZFC3H1-206ENST00000548100 SOGA1O94964 1423 aa31.84■■■□□ 2.69
ZFC3H1-206ENST00000548100 CUX2O14529 1486 aa31.78■■■□□ 2.68
ZFC3H1-206ENST00000548100 RAD54L2Q9Y4B4 1467 aa31.78■■■□□ 2.68
ZFC3H1-206ENST00000548100 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
ZFC3H1-206ENST00000548100 ABCA10Q8WWZ4 1543 aa31.72■■■□□ 2.67
ZFC3H1-206ENST00000548100 TARBP1Q13395 1621 aaKnown RBP31.69■■■□□ 2.66
ZFC3H1-206ENST00000548100 EEA1Q15075 1411 aa31.63■■■□□ 2.65
ZFC3H1-206ENST00000548100 KIF27Q86VH2 1401 aa31.63■■■□□ 2.65
ZFC3H1-206ENST00000548100 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
ZFC3H1-206ENST00000548100 WDR97A6NE52 1622 aa31.58■■■□□ 2.65
ZFC3H1-206ENST00000548100 FAM9AQ8IZU1 332 aaPredicted RBP31.58■■■□□ 2.65
ZFC3H1-206ENST00000548100 TDRD9Q8NDG6 1382 aaKnown RBP31.56■■■□□ 2.64
ZFC3H1-206ENST00000548100 CSRNP3Q8WYN3 585 aa31.51■■■□□ 2.63
ZFC3H1-206ENST00000548100 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
ZFC3H1-206ENST00000548100 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
ZFC3H1-206ENST00000548100 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.638e-7■■■□□ 16.1
ZFC3H1-206ENST00000548100 ABCA5Q8WWZ7 1642 aa31.45■■■□□ 2.63
ZFC3H1-206ENST00000548100 IGF1RP08069 1367 aa31.43■■■□□ 2.62
ZFC3H1-206ENST00000548100 EIF4G3O43432 1585 aaKnown RBP31.35■■■□□ 2.61
ZFC3H1-206ENST00000548100 ERICH3Q5RHP9 1530 aa31.34■■■□□ 2.61
ZFC3H1-206ENST00000548100 GRIN2BQ13224 1484 aa31.34■■■□□ 2.61
ZFC3H1-206ENST00000548100 PRXQ9BXM0 1461 aa31.26■■■□□ 2.59
ZFC3H1-206ENST00000548100 CARMIL1Q5VZK9 1371 aa31.25■■■□□ 2.59
ZFC3H1-206ENST00000548100 PBRM1Q86U86 1689 aa31.24■■■□□ 2.59
ZFC3H1-206ENST00000548100 CUL7Q14999 1698 aa31.19■■■□□ 2.58
ZFC3H1-206ENST00000548100 KIF21BO75037 1637 aa31.17■■■□□ 2.58
ZFC3H1-206ENST00000548100 LOC105371045A0A1W2PR82 267 aa31.15■■■□□ 2.58
ZFC3H1-206ENST00000548100 SNAPC4Q5SXM2 1469 aa31.15■■■□□ 2.58
ZFC3H1-206ENST00000548100 MAGI1Q96QZ7 1491 aaPredicted RBP31.15■■■□□ 2.58
ZFC3H1-206ENST00000548100 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
ZFC3H1-206ENST00000548100 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.58
ZFC3H1-206ENST00000548100 GOLGA3Q08378 1498 aa31.1■■■□□ 2.57
ZFC3H1-206ENST00000548100 ADAMTS12P58397 1594 aa31.09■■■□□ 2.57
ZFC3H1-206ENST00000548100 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
ZFC3H1-206ENST00000548100 SYNJ2O15056 1496 aa31.03■■■□□ 2.56
ZFC3H1-206ENST00000548100 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
ZFC3H1-206ENST00000548100 CHMP7Q8WUX9 453 aaPredicted RBP31■■■□□ 2.55
ZFC3H1-206ENST00000548100 FBLN2P98095 1184 aa30.93■■■□□ 2.54
ZFC3H1-206ENST00000548100 GRIN2AQ12879 1464 aa30.93■■■□□ 2.54
ZFC3H1-206ENST00000548100 TNIKQ9UKE5 1360 aa30.92■■■□□ 2.54
ZFC3H1-206ENST00000548100 NUP160Q12769 1436 aa30.77■■■□□ 2.52
ZFC3H1-206ENST00000548100 CHD1O14646 1710 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms