RNA–Protein interactions for RNA: ENST00000377889.6

SLC3A2-202, Transcript of solute carrier family 3 member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-202ENST00000377889 NISCHQ9Y2I1 1504 aa43.36■■■■■ 4.53
SLC3A2-202ENST00000377889 CCDC180Q9P1Z9 1646 aa37.88■■■■□ 3.65
SLC3A2-202ENST00000377889 ZCCHC6Q5VYS8 1495 aaKnown RBP36.38■■■■□ 3.42
SLC3A2-202ENST00000377889 ABCC9O60706 1549 aa36■■■■□ 3.35
SLC3A2-202ENST00000377889 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
SLC3A2-202ENST00000377889 DCAF1Q9Y4B6 1507 aa35.83■■■■□ 3.33
SLC3A2-202ENST00000377889 MYO15BQ96JP2 1530 aa35.47■■■■□ 3.27
SLC3A2-202ENST00000377889 NACADO15069 1562 aa35.33■■■■□ 3.25
SLC3A2-202ENST00000377889 SHROOM4Q9ULL8 1493 aa35.32■■■■□ 3.24
SLC3A2-202ENST00000377889 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
SLC3A2-202ENST00000377889 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
SLC3A2-202ENST00000377889 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
SLC3A2-202ENST00000377889 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
SLC3A2-202ENST00000377889 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
SLC3A2-202ENST00000377889 SUPT5HO00267 1087 aaKnown RBP33.92■■■■□ 3.02
SLC3A2-202ENST00000377889 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
SLC3A2-202ENST00000377889 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
SLC3A2-202ENST00000377889 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
SLC3A2-202ENST00000377889 MROH2BQ7Z745 1585 aa33.49■■■□□ 2.95
SLC3A2-202ENST00000377889 SMARCA4P51532 1647 aa33.36■■■□□ 2.93
SLC3A2-202ENST00000377889 WIZO95785 1651 aa33.22■■■□□ 2.91
SLC3A2-202ENST00000377889 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.87
SLC3A2-202ENST00000377889 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.87
SLC3A2-202ENST00000377889 TOP2AP11388 1531 aaKnown RBP32.86■■■□□ 2.85
SLC3A2-202ENST00000377889 SMARCA2P51531 1590 aa32.86■■■□□ 2.85
SLC3A2-202ENST00000377889 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
SLC3A2-202ENST00000377889 BAZ1BQ9UIG0 1483 aaKnown RBP32.7■■■□□ 2.83
SLC3A2-202ENST00000377889 NCAPD3P42695 1498 aa32.6■■■□□ 2.81
SLC3A2-202ENST00000377889 CC2D2AQ9P2K1 1620 aa32.56■■■□□ 2.8
SLC3A2-202ENST00000377889 HMGXB3Q12766 1538 aa32.55■■■□□ 2.8
SLC3A2-202ENST00000377889 CCDC88BA6NC98 1476 aa32.53■■■□□ 2.8
SLC3A2-202ENST00000377889 CHIC1Q5VXU3 224 aa32.33■■■□□ 2.77
SLC3A2-202ENST00000377889 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
SLC3A2-202ENST00000377889 CFTRP13569 1480 aa31.84■■■□□ 2.69
SLC3A2-202ENST00000377889 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
SLC3A2-202ENST00000377889 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
SLC3A2-202ENST00000377889 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
SLC3A2-202ENST00000377889 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
SLC3A2-202ENST00000377889 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
SLC3A2-202ENST00000377889 LAMC3Q9Y6N6 1575 aa31.54■■■□□ 2.64
SLC3A2-202ENST00000377889 NESP48681 1621 aa31.54■■■□□ 2.64
SLC3A2-202ENST00000377889 SYNJ1O43426 1573 aa31.48■■■□□ 2.63
SLC3A2-202ENST00000377889 FANCD2Q9BXW9 1451 aa31.43■■■□□ 2.62
SLC3A2-202ENST00000377889 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
SLC3A2-202ENST00000377889 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
SLC3A2-202ENST00000377889 FAM9AQ8IZU1 332 aaPredicted RBP31.33■■■□□ 2.61
SLC3A2-202ENST00000377889 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
SLC3A2-202ENST00000377889 CUX1P39880 1505 aa31.32■■■□□ 2.6
SLC3A2-202ENST00000377889 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
SLC3A2-202ENST00000377889 SOGA1O94964 1423 aa31.18■■■□□ 2.58
SLC3A2-202ENST00000377889 KIF21AQ7Z4S6 1674 aa31.16■■■□□ 2.58
SLC3A2-202ENST00000377889 LOC105371045A0A1W2PR82 267 aa31.11■■■□□ 2.57
SLC3A2-202ENST00000377889 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
SLC3A2-202ENST00000377889 EEA1Q15075 1411 aa31.1■■■□□ 2.57
SLC3A2-202ENST00000377889 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
SLC3A2-202ENST00000377889 RUSC2Q8N2Y8 1516 aa31.05■■■□□ 2.56
SLC3A2-202ENST00000377889 FGD5Q6ZNL6 1462 aa31.03■■■□□ 2.56
SLC3A2-202ENST00000377889 URB2Q14146 1524 aaKnown RBP31.01■■■□□ 2.56
SLC3A2-202ENST00000377889 CSRNP3Q8WYN3 585 aa30.96■■■□□ 2.55
SLC3A2-202ENST00000377889 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
SLC3A2-202ENST00000377889 EHMT2Q96KQ7 1210 aa30.92■■■□□ 2.54
SLC3A2-202ENST00000377889 POLA1P09884 1462 aaPredicted RBP30.9■■■□□ 2.54
SLC3A2-202ENST00000377889 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
SLC3A2-202ENST00000377889 KIF27Q86VH2 1401 aa30.87■■■□□ 2.53
SLC3A2-202ENST00000377889 CUX2O14529 1486 aa30.81■■■□□ 2.52
SLC3A2-202ENST00000377889 RAD54L2Q9Y4B4 1467 aa30.79■■■□□ 2.52
SLC3A2-202ENST00000377889 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
SLC3A2-202ENST00000377889 WDR62O43379 1518 aa30.73■■■□□ 2.51
SLC3A2-202ENST00000377889 KIF21BO75037 1637 aa30.69■■■□□ 2.5
SLC3A2-202ENST00000377889 GOLGA3Q08378 1498 aa30.67■■■□□ 2.5
SLC3A2-202ENST00000377889 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
SLC3A2-202ENST00000377889 WDR97A6NE52 1622 aa30.63■■■□□ 2.49
SLC3A2-202ENST00000377889 UBTFP17480 764 aaKnown RBP30.61■■■□□ 2.49
SLC3A2-202ENST00000377889 TARBP1Q13395 1621 aaKnown RBP30.59■■■□□ 2.49
SLC3A2-202ENST00000377889 PRXQ9BXM0 1461 aa30.57■■■□□ 2.49
SLC3A2-202ENST00000377889 IGF1RP08069 1367 aa30.57■■■□□ 2.48
SLC3A2-202ENST00000377889 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
SLC3A2-202ENST00000377889 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
SLC3A2-202ENST00000377889 TNIKQ9UKE5 1360 aa30.53■■■□□ 2.48
SLC3A2-202ENST00000377889 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
SLC3A2-202ENST00000377889 IFT140Q96RY7 1462 aa30.51■■■□□ 2.47
SLC3A2-202ENST00000377889 ABCA5Q8WWZ7 1642 aa30.49■■■□□ 2.47
SLC3A2-202ENST00000377889 GAPVD1Q14C86 1478 aa30.47■■■□□ 2.47
SLC3A2-202ENST00000377889 CARMIL1Q5VZK9 1371 aa30.44■■■□□ 2.46
SLC3A2-202ENST00000377889 CUL7Q14999 1698 aa30.37■■■□□ 2.45
SLC3A2-202ENST00000377889 CEP162Q5TB80 1403 aa30.37■■■□□ 2.45
SLC3A2-202ENST00000377889 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.452e-7■■■■■ 28.2
SLC3A2-202ENST00000377889 ZNF608Q9ULD9 1512 aaPredicted RBP30.33■■■□□ 2.45
SLC3A2-202ENST00000377889 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
SLC3A2-202ENST00000377889 GRIN2BQ13224 1484 aa30.26■■■□□ 2.43
SLC3A2-202ENST00000377889 EIF4G3O43432 1585 aaKnown RBP30.24■■■□□ 2.43
SLC3A2-202ENST00000377889 CLIP1P30622 1438 aa30.18■■■□□ 2.42
SLC3A2-202ENST00000377889 RANGAP1P46060 587 aaPredicted RBP30.17■■■□□ 2.42
SLC3A2-202ENST00000377889 FHAD1B1AJZ9 1412 aa30.13■■■□□ 2.41
SLC3A2-202ENST00000377889 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
SLC3A2-202ENST00000377889 SNAPC4Q5SXM2 1469 aa30.07■■■□□ 2.4
SLC3A2-202ENST00000377889 MAGI1Q96QZ7 1491 aaPredicted RBP30.02■■■□□ 2.4
SLC3A2-202ENST00000377889 CTTNBP2Q8WZ74 1663 aa30.01■■■□□ 2.4
SLC3A2-202ENST00000377889 SYNJ2O15056 1496 aa29.91■■■□□ 2.38
SLC3A2-202ENST00000377889 HRCP23327 699 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms