RNA–Protein interactions for RNA: ENST00000397282.2

ACTR3B-203, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2 BASIC

Gene ACTR3B, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-203ENST00000397282 NISCHQ9Y2I1 1504 aa45.97■■■■■ 4.95
ACTR3B-203ENST00000397282 CCDC180Q9P1Z9 1646 aa40.59■■■■■ 4.09
ACTR3B-203ENST00000397282 ABCC9O60706 1549 aa39.5■■■■□ 3.91
ACTR3B-203ENST00000397282 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
ACTR3B-203ENST00000397282 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
ACTR3B-203ENST00000397282 NACADO15069 1562 aa38.04■■■■□ 3.68
ACTR3B-203ENST00000397282 RB1CC1Q8TDY2 1594 aa38.03■■■■□ 3.68
ACTR3B-203ENST00000397282 DCAF1Q9Y4B6 1507 aa37.92■■■■□ 3.66
ACTR3B-203ENST00000397282 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
ACTR3B-203ENST00000397282 UNC13AQ9UPW8 1703 aa37.32■■■■□ 3.56
ACTR3B-203ENST00000397282 SCRIBQ14160 1630 aa37.29■■■■□ 3.56
ACTR3B-203ENST00000397282 PABPN1Q86U42 306 aaKnown RBP eCLIP37.04■■■■□ 3.52
ACTR3B-203ENST00000397282 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
ACTR3B-203ENST00000397282 SHROOM4Q9ULL8 1493 aa36.85■■■■□ 3.49
ACTR3B-203ENST00000397282 EIF4G1Q04637 1599 aaKnown RBP35.92■■■■□ 3.34
ACTR3B-203ENST00000397282 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
ACTR3B-203ENST00000397282 CECR2Q9BXF3 1484 aa35.88■■■■□ 3.33
ACTR3B-203ENST00000397282 CC2D2AQ9P2K1 1620 aa35.69■■■■□ 3.3
ACTR3B-203ENST00000397282 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
ACTR3B-203ENST00000397282 BAZ1AQ9NRL2 1556 aaPredicted RBP35.57■■■■□ 3.28
ACTR3B-203ENST00000397282 MROH2BQ7Z745 1585 aa35.52■■■■□ 3.28
ACTR3B-203ENST00000397282 ATAD2BQ9ULI0 1458 aa35.27■■■■□ 3.24
ACTR3B-203ENST00000397282 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
ACTR3B-203ENST00000397282 WIZO95785 1651 aa35.21■■■■□ 3.23
ACTR3B-203ENST00000397282 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
ACTR3B-203ENST00000397282 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
ACTR3B-203ENST00000397282 NCAPD3P42695 1498 aa35.12■■■■□ 3.21
ACTR3B-203ENST00000397282 BAZ1BQ9UIG0 1483 aaKnown RBP35.02■■■■□ 3.2
ACTR3B-203ENST00000397282 HMGXB3Q12766 1538 aa34.99■■■■□ 3.19
ACTR3B-203ENST00000397282 SUPT5HO00267 1087 aaKnown RBP34.85■■■■□ 3.17
ACTR3B-203ENST00000397282 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
ACTR3B-203ENST00000397282 CCDC88BA6NC98 1476 aa34.38■■■■□ 3.09
ACTR3B-203ENST00000397282 NESP48681 1621 aa34.34■■■■□ 3.09
ACTR3B-203ENST00000397282 CADPSQ9ULU8 1353 aa34.16■■■■□ 3.06
ACTR3B-203ENST00000397282 LAMC3Q9Y6N6 1575 aa34.14■■■■□ 3.06
ACTR3B-203ENST00000397282 CFTRP13569 1480 aa34.04■■■■□ 3.04
ACTR3B-203ENST00000397282 ERCC6Q03468 1493 aa33.95■■■■□ 3.02
ACTR3B-203ENST00000397282 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
ACTR3B-203ENST00000397282 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
ACTR3B-203ENST00000397282 PRDM2Q13029 1718 aa33.85■■■■□ 3.01
ACTR3B-203ENST00000397282 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
ACTR3B-203ENST00000397282 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
ACTR3B-203ENST00000397282 THOC2Q8NI27 1593 aaKnown RBP33.63■■■□□ 2.97
ACTR3B-203ENST00000397282 MRC2Q9UBG0 1479 aa33.55■■■□□ 2.96
ACTR3B-203ENST00000397282 URB2Q14146 1524 aaKnown RBP33.49■■■□□ 2.95
ACTR3B-203ENST00000397282 WDR62O43379 1518 aa33.42■■■□□ 2.94
ACTR3B-203ENST00000397282 ABCC8Q09428 1581 aa33.37■■■□□ 2.93
ACTR3B-203ENST00000397282 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
ACTR3B-203ENST00000397282 CUX2O14529 1486 aa33.29■■■□□ 2.92
ACTR3B-203ENST00000397282 DNMBPQ6XZF7 1577 aa33.29■■■□□ 2.92
ACTR3B-203ENST00000397282 CUX1P39880 1505 aa33.28■■■□□ 2.92
ACTR3B-203ENST00000397282 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.9
ACTR3B-203ENST00000397282 SYNJ1O43426 1573 aa33.16■■■□□ 2.9
ACTR3B-203ENST00000397282 POLA1P09884 1462 aaPredicted RBP33.09■■■□□ 2.89
ACTR3B-203ENST00000397282 FGD5Q6ZNL6 1462 aa33.09■■■□□ 2.89
ACTR3B-203ENST00000397282 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
ACTR3B-203ENST00000397282 BIVM-ERCC5R4GMW8 1640 aa33.05■■■□□ 2.88
ACTR3B-203ENST00000397282 RAD54L2Q9Y4B4 1467 aa33.01■■■□□ 2.88
ACTR3B-203ENST00000397282 SOGA1O94964 1423 aa32.94■■■□□ 2.86
ACTR3B-203ENST00000397282 IFT140Q96RY7 1462 aa32.94■■■□□ 2.86
ACTR3B-203ENST00000397282 TARBP1Q13395 1621 aaKnown RBP32.94■■■□□ 2.86
ACTR3B-203ENST00000397282 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
ACTR3B-203ENST00000397282 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
ACTR3B-203ENST00000397282 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
ACTR3B-203ENST00000397282 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
ACTR3B-203ENST00000397282 AQRO60306 1485 aaKnown RBP eCLIP32.77■■■□□ 2.841e-6■■■■■ 33.8
ACTR3B-203ENST00000397282 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
ACTR3B-203ENST00000397282 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
ACTR3B-203ENST00000397282 CHIC1Q5VXU3 224 aa32.69■■■□□ 2.82
ACTR3B-203ENST00000397282 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
ACTR3B-203ENST00000397282 GAPVD1Q14C86 1478 aa32.56■■■□□ 2.8
ACTR3B-203ENST00000397282 PBRM1Q86U86 1689 aa32.52■■■□□ 2.8
ACTR3B-203ENST00000397282 GRIN2BQ13224 1484 aa32.46■■■□□ 2.79
ACTR3B-203ENST00000397282 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
ACTR3B-203ENST00000397282 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
ACTR3B-203ENST00000397282 KIF27Q86VH2 1401 aa32.43■■■□□ 2.78
ACTR3B-203ENST00000397282 FBLN2P98095 1184 aa32.34■■■□□ 2.77
ACTR3B-203ENST00000397282 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
ACTR3B-203ENST00000397282 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
ACTR3B-203ENST00000397282 CHD1O14646 1710 aa32.29■■■□□ 2.76
ACTR3B-203ENST00000397282 IGF1RP08069 1367 aa32.27■■■□□ 2.76
ACTR3B-203ENST00000397282 ADAMTS12P58397 1594 aa32.25■■■□□ 2.75
ACTR3B-203ENST00000397282 FAM9AQ8IZU1 332 aaPredicted RBP32.25■■■□□ 2.75
ACTR3B-203ENST00000397282 CHMP7Q8WUX9 453 aaPredicted RBP32.21■■■□□ 2.75
ACTR3B-203ENST00000397282 SYNJ2O15056 1496 aa32.2■■■□□ 2.75
ACTR3B-203ENST00000397282 FHAD1B1AJZ9 1412 aa32.16■■■□□ 2.74
ACTR3B-203ENST00000397282 CUL7Q14999 1698 aa32.12■■■□□ 2.73
ACTR3B-203ENST00000397282 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
ACTR3B-203ENST00000397282 GRIN2AQ12879 1464 aa32.08■■■□□ 2.73
ACTR3B-203ENST00000397282 OSCARQ8IYS5 282 aa32.07■■■□□ 2.72
ACTR3B-203ENST00000397282 CSRNP3Q8WYN3 585 aa32.03■■■□□ 2.72
ACTR3B-203ENST00000397282 EEA1Q15075 1411 aa32.02■■■□□ 2.72
ACTR3B-203ENST00000397282 CEP170Q5SW79 1584 aa31.96■■■□□ 2.71
ACTR3B-203ENST00000397282 EHMT2Q96KQ7 1210 aa31.93■■■□□ 2.7
ACTR3B-203ENST00000397282 PRXQ9BXM0 1461 aa31.93■■■□□ 2.7
ACTR3B-203ENST00000397282 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
ACTR3B-203ENST00000397282 NUP160Q12769 1436 aa31.87■■■□□ 2.69
ACTR3B-203ENST00000397282 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
ACTR3B-203ENST00000397282 DNAJC5Q9H3Z4 198 aa31.82■■■□□ 2.68
ACTR3B-203ENST00000397282 KIF21BO75037 1637 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms