Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDHGB3Q9Y5G1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGB3Q9Y5G1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGB3Q9Y5G1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 ZNRF2P2-203ENST00000454624 420 ntBASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGB3Q9Y5G1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHGB3Q9Y5G1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB3Q9Y5G1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PCDHGB3Q9Y5G1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB3Q9Y5G1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGB3Q9Y5G1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGB3Q9Y5G1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHGB3Q9Y5G1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHGB3Q9Y5G1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGB3Q9Y5G1 BX255925.1-201ENST00000566954 1854 ntBASIC23.87■■□□□ 1.41
PCDHGB3Q9Y5G1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB3Q9Y5G1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB3Q9Y5G1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHGB3Q9Y5G1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB3Q9Y5G1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB3Q9Y5G1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB3Q9Y5G1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB3Q9Y5G1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB3Q9Y5G1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB3Q9Y5G1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHGB3Q9Y5G1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
PCDHGB3Q9Y5G1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB3Q9Y5G1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB3Q9Y5G1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB3Q9Y5G1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGB3Q9Y5G1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHGB3Q9Y5G1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB3Q9Y5G1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB3Q9Y5G1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHGB3Q9Y5G1 AC021231.2-201ENST00000594613 730 ntBASIC23.81■■□□□ 1.4
PCDHGB3Q9Y5G1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB3Q9Y5G1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB3Q9Y5G1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHGB3Q9Y5G1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB3Q9Y5G1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB3Q9Y5G1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGB3Q9Y5G1 LINC00273-201ENST00000539813 1452 ntBASIC23.8■■□□□ 1.4
PCDHGB3Q9Y5G1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB3Q9Y5G1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDHGB3Q9Y5G1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB3Q9Y5G1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB3Q9Y5G1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB3Q9Y5G1 AC135983.2-203ENST00000454486 1613 ntBASIC23.78■■□□□ 1.4
PCDHGB3Q9Y5G1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB3Q9Y5G1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB3Q9Y5G1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGB3Q9Y5G1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHGB3Q9Y5G1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PCDHGB3Q9Y5G1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB3Q9Y5G1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 AC100797.4-201ENST00000631653 1827 ntBASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGB3Q9Y5G1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB3Q9Y5G1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB3Q9Y5G1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms