Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHB11Q9Y5F2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHB11Q9Y5F2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB11Q9Y5F2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB11Q9Y5F2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
PCDHB11Q9Y5F2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB11Q9Y5F2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB11Q9Y5F2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB11Q9Y5F2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB11Q9Y5F2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB11Q9Y5F2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB11Q9Y5F2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB11Q9Y5F2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB11Q9Y5F2 WHAMMP2-203ENST00000563942 1603 ntBASIC24.83■■□□□ 1.56
PCDHB11Q9Y5F2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
PCDHB11Q9Y5F2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHB11Q9Y5F2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHB11Q9Y5F2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB11Q9Y5F2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB11Q9Y5F2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
PCDHB11Q9Y5F2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PCDHB11Q9Y5F2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHB11Q9Y5F2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHB11Q9Y5F2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.79■■□□□ 1.56
PCDHB11Q9Y5F2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHB11Q9Y5F2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHB11Q9Y5F2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB11Q9Y5F2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB11Q9Y5F2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB11Q9Y5F2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHB11Q9Y5F2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHB11Q9Y5F2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHB11Q9Y5F2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHB11Q9Y5F2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHB11Q9Y5F2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.76■■□□□ 1.55
PCDHB11Q9Y5F2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHB11Q9Y5F2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHB11Q9Y5F2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHB11Q9Y5F2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.75■■□□□ 1.55
PCDHB11Q9Y5F2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.75■■□□□ 1.55
PCDHB11Q9Y5F2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHB11Q9Y5F2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHB11Q9Y5F2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHB11Q9Y5F2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PCDHB11Q9Y5F2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB11Q9Y5F2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHB11Q9Y5F2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB11Q9Y5F2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB11Q9Y5F2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHB11Q9Y5F2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB11Q9Y5F2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB11Q9Y5F2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB11Q9Y5F2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PCDHB11Q9Y5F2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB11Q9Y5F2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHB11Q9Y5F2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB11Q9Y5F2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PCDHB11Q9Y5F2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
PCDHB11Q9Y5F2 RARRES2P2-201ENST00000394842 485 ntBASIC24.71■■□□□ 1.55
PCDHB11Q9Y5F2 AC142086.6-201ENST00000621154 1765 ntBASIC24.71■■□□□ 1.55
PCDHB11Q9Y5F2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDHB11Q9Y5F2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB11Q9Y5F2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB11Q9Y5F2 AC100797.4-201ENST00000631653 1827 ntBASIC24.7■■□□□ 1.54
PCDHB11Q9Y5F2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
PCDHB11Q9Y5F2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHB11Q9Y5F2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHB11Q9Y5F2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 GPX1-201ENST00000419349 1106 ntBASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 ABHD17AP5-201ENST00000580133 923 ntBASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB11Q9Y5F2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB11Q9Y5F2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB11Q9Y5F2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB11Q9Y5F2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB11Q9Y5F2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB11Q9Y5F2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHB11Q9Y5F2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHB11Q9Y5F2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHB11Q9Y5F2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms