Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MAP1LC3AQ9H492 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MAP1LC3AQ9H492 AC091060.1-201ENST00000623524 1766 ntBASIC18.43■□□□□ 0.54
MAP1LC3AQ9H492 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.43■□□□□ 0.54
MAP1LC3AQ9H492 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MAP1LC3AQ9H492 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MAP1LC3AQ9H492 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.42■□□□□ 0.54
MAP1LC3AQ9H492 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MAP1LC3AQ9H492 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MAP1LC3AQ9H492 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MAP1LC3AQ9H492 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MAP1LC3AQ9H492 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 AC006077.2-201ENST00000623591 457 ntBASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.41■□□□□ 0.54
MAP1LC3AQ9H492 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MAP1LC3AQ9H492 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MAP1LC3AQ9H492 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MAP1LC3AQ9H492 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
MAP1LC3AQ9H492 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MAP1LC3AQ9H492 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MAP1LC3AQ9H492 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MAP1LC3AQ9H492 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MAP1LC3AQ9H492 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MAP1LC3AQ9H492 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MAP1LC3AQ9H492 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MAP1LC3AQ9H492 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
MAP1LC3AQ9H492 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.38■□□□□ 0.53
MAP1LC3AQ9H492 WASH5P-204ENST00000632292 975 ntBASIC18.37■□□□□ 0.53
MAP1LC3AQ9H492 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
MAP1LC3AQ9H492 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MAP1LC3AQ9H492 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
MAP1LC3AQ9H492 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
MAP1LC3AQ9H492 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MAP1LC3AQ9H492 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MAP1LC3AQ9H492 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.36■□□□□ 0.53
MAP1LC3AQ9H492 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 AC020928.2-201ENST00000588717 2197 ntBASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MAP1LC3AQ9H492 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
MAP1LC3AQ9H492 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.34■□□□□ 0.53
MAP1LC3AQ9H492 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.34■□□□□ 0.53
MAP1LC3AQ9H492 AC145676.1-201ENST00000514988 2004 ntBASIC18.34■□□□□ 0.53
MAP1LC3AQ9H492 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
MAP1LC3AQ9H492 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.34■□□□□ 0.53
MAP1LC3AQ9H492 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.33■□□□□ 0.52
MAP1LC3AQ9H492 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MAP1LC3AQ9H492 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MAP1LC3AQ9H492 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MAP1LC3AQ9H492 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MAP1LC3AQ9H492 DYNLL1-208ENST00000550178 581 ntBASIC18.32■□□□□ 0.52
MAP1LC3AQ9H492 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.32■□□□□ 0.52
MAP1LC3AQ9H492 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MAP1LC3AQ9H492 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MAP1LC3AQ9H492 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MAP1LC3AQ9H492 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MAP1LC3AQ9H492 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MAP1LC3AQ9H492 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MAP1LC3AQ9H492 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.3■□□□□ 0.52
MAP1LC3AQ9H492 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MAP1LC3AQ9H492 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MAP1LC3AQ9H492 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MAP1LC3AQ9H492 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.3■□□□□ 0.52
MAP1LC3AQ9H492 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MAP1LC3AQ9H492 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MAP1LC3AQ9H492 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.29■□□□□ 0.52
MAP1LC3AQ9H492 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.29■□□□□ 0.52
MAP1LC3AQ9H492 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MAP1LC3AQ9H492 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.28■□□□□ 0.52
MAP1LC3AQ9H492 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MAP1LC3AQ9H492 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MAP1LC3AQ9H492 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MAP1LC3AQ9H492 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MAP1LC3AQ9H492 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MAP1LC3AQ9H492 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MAP1LC3AQ9H492 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MAP1LC3AQ9H492 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MAP1LC3AQ9H492 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms