Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCRT1Q9BWW7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.3■□□□□ 0.84
SCRT1Q9BWW7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCRT1Q9BWW7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCRT1Q9BWW7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SCRT1Q9BWW7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCRT1Q9BWW7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCRT1Q9BWW7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SCRT1Q9BWW7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCRT1Q9BWW7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCRT1Q9BWW7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
SCRT1Q9BWW7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCRT1Q9BWW7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.28■□□□□ 0.84
SCRT1Q9BWW7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SCRT1Q9BWW7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.27■□□□□ 0.84
SCRT1Q9BWW7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCRT1Q9BWW7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCRT1Q9BWW7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCRT1Q9BWW7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.26■□□□□ 0.83
SCRT1Q9BWW7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.26■□□□□ 0.83
SCRT1Q9BWW7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCRT1Q9BWW7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCRT1Q9BWW7 LINC01003-201ENST00000564834 1764 ntBASIC20.25■□□□□ 0.83
SCRT1Q9BWW7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.25■□□□□ 0.83
SCRT1Q9BWW7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCRT1Q9BWW7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.24■□□□□ 0.83
SCRT1Q9BWW7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCRT1Q9BWW7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCRT1Q9BWW7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCRT1Q9BWW7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCRT1Q9BWW7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SCRT1Q9BWW7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCRT1Q9BWW7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCRT1Q9BWW7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCRT1Q9BWW7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCRT1Q9BWW7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.21■□□□□ 0.83
SCRT1Q9BWW7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCRT1Q9BWW7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SCRT1Q9BWW7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCRT1Q9BWW7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCRT1Q9BWW7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCRT1Q9BWW7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCRT1Q9BWW7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCRT1Q9BWW7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SCRT1Q9BWW7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 AC145676.1-201ENST00000514988 2004 ntBASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCRT1Q9BWW7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCRT1Q9BWW7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCRT1Q9BWW7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SCRT1Q9BWW7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCRT1Q9BWW7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCRT1Q9BWW7 AC010864.1-201ENST00000609407 1511 ntBASIC20.16■□□□□ 0.82
SCRT1Q9BWW7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCRT1Q9BWW7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCRT1Q9BWW7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCRT1Q9BWW7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.15■□□□□ 0.82
SCRT1Q9BWW7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.15■□□□□ 0.82
SCRT1Q9BWW7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SCRT1Q9BWW7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.14■□□□□ 0.81
SCRT1Q9BWW7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.14■□□□□ 0.81
SCRT1Q9BWW7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SCRT1Q9BWW7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.13■□□□□ 0.81
SCRT1Q9BWW7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCRT1Q9BWW7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SCRT1Q9BWW7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.12■□□□□ 0.81
SCRT1Q9BWW7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCRT1Q9BWW7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SCRT1Q9BWW7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.12■□□□□ 0.81
SCRT1Q9BWW7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
SCRT1Q9BWW7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCRT1Q9BWW7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCRT1Q9BWW7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SCRT1Q9BWW7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCRT1Q9BWW7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.1■□□□□ 0.81
SCRT1Q9BWW7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.1■□□□□ 0.81
SCRT1Q9BWW7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.1■□□□□ 0.81
SCRT1Q9BWW7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCRT1Q9BWW7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCRT1Q9BWW7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCRT1Q9BWW7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCRT1Q9BWW7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms