Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.97■□□□□ 0.95
CLCC1Q96S66 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLCC1Q96S66 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLCC1Q96S66 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCC1Q96S66 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCC1Q96S66 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.97■□□□□ 0.95
CLCC1Q96S66 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCC1Q96S66 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCC1Q96S66 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCC1Q96S66 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCC1Q96S66 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCC1Q96S66 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCC1Q96S66 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.96■□□□□ 0.95
CLCC1Q96S66 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCC1Q96S66 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CLCC1Q96S66 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCC1Q96S66 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCC1Q96S66 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.95■□□□□ 0.94
CLCC1Q96S66 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCC1Q96S66 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCC1Q96S66 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCC1Q96S66 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLCC1Q96S66 AC005559.1-201ENST00000589661 871 ntBASIC20.94■□□□□ 0.94
CLCC1Q96S66 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCC1Q96S66 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCC1Q96S66 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCC1Q96S66 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCC1Q96S66 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCC1Q96S66 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCC1Q96S66 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCC1Q96S66 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.93■□□□□ 0.94
CLCC1Q96S66 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.93■□□□□ 0.94
CLCC1Q96S66 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCC1Q96S66 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.92■□□□□ 0.94
CLCC1Q96S66 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCC1Q96S66 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCC1Q96S66 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCC1Q96S66 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.92■□□□□ 0.94
CLCC1Q96S66 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLCC1Q96S66 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCC1Q96S66 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.91■□□□□ 0.94
CLCC1Q96S66 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCC1Q96S66 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCC1Q96S66 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCC1Q96S66 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCC1Q96S66 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CLCC1Q96S66 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCC1Q96S66 DRD5P2-201ENST00000421395 2012 ntBASIC20.9■□□□□ 0.94
CLCC1Q96S66 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCC1Q96S66 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCC1Q96S66 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.89■□□□□ 0.94
CLCC1Q96S66 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CLCC1Q96S66 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCC1Q96S66 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCC1Q96S66 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLCC1Q96S66 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCC1Q96S66 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCC1Q96S66 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCC1Q96S66 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCC1Q96S66 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCC1Q96S66 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCC1Q96S66 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CLCC1Q96S66 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCC1Q96S66 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLCC1Q96S66 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCC1Q96S66 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCC1Q96S66 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCC1Q96S66 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCC1Q96S66 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCC1Q96S66 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLCC1Q96S66 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCC1Q96S66 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCC1Q96S66 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCC1Q96S66 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCC1Q96S66 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCC1Q96S66 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CLCC1Q96S66 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.84■□□□□ 0.93
CLCC1Q96S66 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCC1Q96S66 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.84■□□□□ 0.93
CLCC1Q96S66 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCC1Q96S66 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCC1Q96S66 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCC1Q96S66 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
CLCC1Q96S66 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.83■□□□□ 0.93
CLCC1Q96S66 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.83■□□□□ 0.93
CLCC1Q96S66 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLCC1Q96S66 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCC1Q96S66 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCC1Q96S66 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCC1Q96S66 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCC1Q96S66 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCC1Q96S66 DUX4L28-201ENST00000623687 678 ntBASIC20.82■□□□□ 0.92
CLCC1Q96S66 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCC1Q96S66 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCC1Q96S66 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCC1Q96S66 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCC1Q96S66 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCC1Q96S66 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CLCC1Q96S66 MIR3665-201ENST00000578708 105 ntBASIC20.81■□□□□ 0.92
CLCC1Q96S66 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms