Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NR1H4Q96RI1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NR1H4Q96RI1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NR1H4Q96RI1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NR1H4Q96RI1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
NR1H4Q96RI1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NR1H4Q96RI1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
NR1H4Q96RI1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NR1H4Q96RI1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.89■■□□□ 1.41
NR1H4Q96RI1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NR1H4Q96RI1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NR1H4Q96RI1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.88■■□□□ 1.41
NR1H4Q96RI1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NR1H4Q96RI1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.88■■□□□ 1.41
NR1H4Q96RI1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NR1H4Q96RI1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.88■■□□□ 1.41
NR1H4Q96RI1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NR1H4Q96RI1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.86■■□□□ 1.41
NR1H4Q96RI1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
NR1H4Q96RI1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NR1H4Q96RI1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NR1H4Q96RI1 AC006077.2-201ENST00000623591 457 ntBASIC23.85■■□□□ 1.41
NR1H4Q96RI1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NR1H4Q96RI1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
NR1H4Q96RI1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NR1H4Q96RI1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
NR1H4Q96RI1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NR1H4Q96RI1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NR1H4Q96RI1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NR1H4Q96RI1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NR1H4Q96RI1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.81■■□□□ 1.4
NR1H4Q96RI1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NR1H4Q96RI1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H4Q96RI1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H4Q96RI1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H4Q96RI1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H4Q96RI1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.8■■□□□ 1.4
NR1H4Q96RI1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NR1H4Q96RI1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NR1H4Q96RI1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.79■■□□□ 1.4
NR1H4Q96RI1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NR1H4Q96RI1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NR1H4Q96RI1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NR1H4Q96RI1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NR1H4Q96RI1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NR1H4Q96RI1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NR1H4Q96RI1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NR1H4Q96RI1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NR1H4Q96RI1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
NR1H4Q96RI1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NR1H4Q96RI1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.76■■□□□ 1.39
NR1H4Q96RI1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NR1H4Q96RI1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NR1H4Q96RI1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
NR1H4Q96RI1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NR1H4Q96RI1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
NR1H4Q96RI1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NR1H4Q96RI1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NR1H4Q96RI1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NR1H4Q96RI1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NR1H4Q96RI1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NR1H4Q96RI1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NR1H4Q96RI1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.7■■□□□ 1.38
NR1H4Q96RI1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
NR1H4Q96RI1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.7■■□□□ 1.38
NR1H4Q96RI1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NR1H4Q96RI1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.68■■□□□ 1.38
NR1H4Q96RI1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
NR1H4Q96RI1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NR1H4Q96RI1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.68■■□□□ 1.38
NR1H4Q96RI1 ZNRF2P1-201ENST00000441407 443 ntBASIC23.67■■□□□ 1.38
NR1H4Q96RI1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
NR1H4Q96RI1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.67■■□□□ 1.38
NR1H4Q96RI1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms