Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.81■■□□□ 1.24
BBS1Q8NFJ9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
BBS1Q8NFJ9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.8■■□□□ 1.24
BBS1Q8NFJ9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
BBS1Q8NFJ9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BBS1Q8NFJ9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
BBS1Q8NFJ9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
BBS1Q8NFJ9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.78■■□□□ 1.24
BBS1Q8NFJ9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
BBS1Q8NFJ9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.78■■□□□ 1.24
BBS1Q8NFJ9 AP002414.2-202ENST00000590929 1450 ntBASIC22.78■■□□□ 1.24
BBS1Q8NFJ9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.78■■□□□ 1.24
BBS1Q8NFJ9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.77■■□□□ 1.24
BBS1Q8NFJ9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
BBS1Q8NFJ9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.77■■□□□ 1.24
BBS1Q8NFJ9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
BBS1Q8NFJ9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
BBS1Q8NFJ9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BBS1Q8NFJ9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
BBS1Q8NFJ9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
BBS1Q8NFJ9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.76■■□□□ 1.23
BBS1Q8NFJ9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.76■■□□□ 1.23
BBS1Q8NFJ9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
BBS1Q8NFJ9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
BBS1Q8NFJ9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.75■■□□□ 1.23
BBS1Q8NFJ9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
BBS1Q8NFJ9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
BBS1Q8NFJ9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
BBS1Q8NFJ9 MIR762-201ENST00000390236 83 ntBASIC22.74■■□□□ 1.23
BBS1Q8NFJ9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.74■■□□□ 1.23
BBS1Q8NFJ9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.73■■□□□ 1.23
BBS1Q8NFJ9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BBS1Q8NFJ9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BBS1Q8NFJ9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
BBS1Q8NFJ9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.72■■□□□ 1.23
BBS1Q8NFJ9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BBS1Q8NFJ9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.72■■□□□ 1.23
BBS1Q8NFJ9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BBS1Q8NFJ9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
BBS1Q8NFJ9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BBS1Q8NFJ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
BBS1Q8NFJ9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
BBS1Q8NFJ9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.7■■□□□ 1.22
BBS1Q8NFJ9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.7■■□□□ 1.22
BBS1Q8NFJ9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
BBS1Q8NFJ9 AL449106.1-201ENST00000608517 1980 ntBASIC22.69■■□□□ 1.22
BBS1Q8NFJ9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BBS1Q8NFJ9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BBS1Q8NFJ9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.68■■□□□ 1.22
BBS1Q8NFJ9 AC135731.1-201ENST00000569415 2548 ntBASIC22.68■■□□□ 1.22
BBS1Q8NFJ9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
BBS1Q8NFJ9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BBS1Q8NFJ9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
BBS1Q8NFJ9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.66■■□□□ 1.22
BBS1Q8NFJ9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 AC135983.2-203ENST00000454486 1613 ntBASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BBS1Q8NFJ9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
BBS1Q8NFJ9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
BBS1Q8NFJ9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
BBS1Q8NFJ9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
BBS1Q8NFJ9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
BBS1Q8NFJ9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 WHAMMP2-203ENST00000563942 1603 ntBASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BBS1Q8NFJ9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.62■■□□□ 1.21
BBS1Q8NFJ9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
BBS1Q8NFJ9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
BBS1Q8NFJ9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.61■■□□□ 1.21
BBS1Q8NFJ9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
BBS1Q8NFJ9 AC018358.1-201ENST00000631079 1402 ntBASIC22.61■■□□□ 1.21
BBS1Q8NFJ9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.61■■□□□ 1.21
BBS1Q8NFJ9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
BBS1Q8NFJ9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BBS1Q8NFJ9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.6■■□□□ 1.21
BBS1Q8NFJ9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.6■■□□□ 1.21
BBS1Q8NFJ9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BBS1Q8NFJ9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
BBS1Q8NFJ9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BBS1Q8NFJ9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms