Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPEB3Q8NE35 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPEB3Q8NE35 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.2■■□□□ 1.14
CPEB3Q8NE35 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPEB3Q8NE35 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPEB3Q8NE35 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.19■■□□□ 1.14
CPEB3Q8NE35 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPEB3Q8NE35 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.19■■□□□ 1.14
CPEB3Q8NE35 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CPEB3Q8NE35 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPEB3Q8NE35 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CPEB3Q8NE35 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPEB3Q8NE35 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.17■■□□□ 1.14
CPEB3Q8NE35 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.17■■□□□ 1.14
CPEB3Q8NE35 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.17■■□□□ 1.14
CPEB3Q8NE35 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.17■■□□□ 1.14
CPEB3Q8NE35 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPEB3Q8NE35 AC142086.6-201ENST00000621154 1765 ntBASIC22.17■■□□□ 1.14
CPEB3Q8NE35 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CPEB3Q8NE35 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPEB3Q8NE35 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.16■■□□□ 1.14
CPEB3Q8NE35 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.16■■□□□ 1.14
CPEB3Q8NE35 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPEB3Q8NE35 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPEB3Q8NE35 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CPEB3Q8NE35 DUX4L11-201ENST00000611504 1267 ntBASIC22.15■■□□□ 1.14
CPEB3Q8NE35 DUX4L12-201ENST00000614593 1267 ntBASIC22.15■■□□□ 1.14
CPEB3Q8NE35 DUX4L14-201ENST00000621227 1267 ntBASIC22.15■■□□□ 1.14
CPEB3Q8NE35 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPEB3Q8NE35 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CPEB3Q8NE35 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
CPEB3Q8NE35 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPEB3Q8NE35 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPEB3Q8NE35 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPEB3Q8NE35 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.13■■□□□ 1.13
CPEB3Q8NE35 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.13■■□□□ 1.13
CPEB3Q8NE35 AP002414.2-202ENST00000590929 1450 ntBASIC22.13■■□□□ 1.13
CPEB3Q8NE35 AC110285.7-201ENST00000624417 1536 ntBASIC22.12■■□□□ 1.13
CPEB3Q8NE35 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPEB3Q8NE35 DUX4L13-201ENST00000554103 1267 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L15-201ENST00000611059 1267 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L23-201ENST00000615195 1269 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L24-201ENST00000617576 1269 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L22-201ENST00000618238 1269 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L20-201ENST00000619712 1269 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L21-201ENST00000622058 1269 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L10-201ENST00000622460 1267 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 DUX4L25-201ENST00000624915 1269 ntBASIC22.11■■□□□ 1.13
CPEB3Q8NE35 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.11■■□□□ 1.13
CPEB3Q8NE35 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPEB3Q8NE35 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPEB3Q8NE35 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.1■■□□□ 1.13
CPEB3Q8NE35 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.1■■□□□ 1.13
CPEB3Q8NE35 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPEB3Q8NE35 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.1■■□□□ 1.13
CPEB3Q8NE35 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPEB3Q8NE35 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.09■■□□□ 1.13
CPEB3Q8NE35 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPEB3Q8NE35 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPEB3Q8NE35 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CPEB3Q8NE35 MIR7108-201ENST00000614319 87 ntBASIC22.08■■□□□ 1.13
CPEB3Q8NE35 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CPEB3Q8NE35 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CPEB3Q8NE35 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.07■■□□□ 1.12
CPEB3Q8NE35 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.07■■□□□ 1.12
CPEB3Q8NE35 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPEB3Q8NE35 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPEB3Q8NE35 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
CPEB3Q8NE35 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPEB3Q8NE35 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPEB3Q8NE35 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPEB3Q8NE35 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPEB3Q8NE35 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPEB3Q8NE35 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CPEB3Q8NE35 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CPEB3Q8NE35 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPEB3Q8NE35 CR559946.2-201ENST00000623684 991 ntBASIC22.01■■□□□ 1.11
CPEB3Q8NE35 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CPEB3Q8NE35 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms