Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LSMEM1Q8N8F7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.21■■□□□ 1.31
LSMEM1Q8N8F7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.21■■□□□ 1.31
LSMEM1Q8N8F7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LSMEM1Q8N8F7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.19■■□□□ 1.3
LSMEM1Q8N8F7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.19■■□□□ 1.3
LSMEM1Q8N8F7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LSMEM1Q8N8F7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LSMEM1Q8N8F7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LSMEM1Q8N8F7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.17■■□□□ 1.3
LSMEM1Q8N8F7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.17■■□□□ 1.3
LSMEM1Q8N8F7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LSMEM1Q8N8F7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LSMEM1Q8N8F7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.17■■□□□ 1.3
LSMEM1Q8N8F7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.16■■□□□ 1.3
LSMEM1Q8N8F7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.16■■□□□ 1.3
LSMEM1Q8N8F7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LSMEM1Q8N8F7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LSMEM1Q8N8F7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LSMEM1Q8N8F7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LSMEM1Q8N8F7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LSMEM1Q8N8F7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LSMEM1Q8N8F7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LSMEM1Q8N8F7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LSMEM1Q8N8F7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LSMEM1Q8N8F7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LSMEM1Q8N8F7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LSMEM1Q8N8F7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSMEM1Q8N8F7 AL121749.1-202ENST00000609313 2153 ntBASIC23.13■■□□□ 1.29
LSMEM1Q8N8F7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LSMEM1Q8N8F7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
LSMEM1Q8N8F7 AC018358.1-201ENST00000631079 1402 ntBASIC23.12■■□□□ 1.29
LSMEM1Q8N8F7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LSMEM1Q8N8F7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LSMEM1Q8N8F7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
LSMEM1Q8N8F7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LSMEM1Q8N8F7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
LSMEM1Q8N8F7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
LSMEM1Q8N8F7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
LSMEM1Q8N8F7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
LSMEM1Q8N8F7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LSMEM1Q8N8F7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LSMEM1Q8N8F7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LSMEM1Q8N8F7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
LSMEM1Q8N8F7 AC021231.2-201ENST00000594613 730 ntBASIC23.08■■□□□ 1.29
LSMEM1Q8N8F7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LSMEM1Q8N8F7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LSMEM1Q8N8F7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LSMEM1Q8N8F7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LSMEM1Q8N8F7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
LSMEM1Q8N8F7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LSMEM1Q8N8F7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LSMEM1Q8N8F7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.07■■□□□ 1.28
LSMEM1Q8N8F7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.07■■□□□ 1.28
LSMEM1Q8N8F7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LSMEM1Q8N8F7 DUX4L29-201ENST00000425409 679 ntBASIC23.06■■□□□ 1.28
LSMEM1Q8N8F7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LSMEM1Q8N8F7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.06■■□□□ 1.28
LSMEM1Q8N8F7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
LSMEM1Q8N8F7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.05■■□□□ 1.28
LSMEM1Q8N8F7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LSMEM1Q8N8F7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LSMEM1Q8N8F7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LSMEM1Q8N8F7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LSMEM1Q8N8F7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LSMEM1Q8N8F7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LSMEM1Q8N8F7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LSMEM1Q8N8F7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LSMEM1Q8N8F7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
LSMEM1Q8N8F7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LSMEM1Q8N8F7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LSMEM1Q8N8F7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LSMEM1Q8N8F7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LSMEM1Q8N8F7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LSMEM1Q8N8F7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LSMEM1Q8N8F7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LSMEM1Q8N8F7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23■■□□□ 1.27
LSMEM1Q8N8F7 RPS2P35-201ENST00000443417 897 ntBASIC23■■□□□ 1.27
LSMEM1Q8N8F7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms