Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC9CQ8N5M4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9CQ8N5M4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20■□□□□ 0.79
TTC9CQ8N5M4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TTC9CQ8N5M4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TTC9CQ8N5M4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9CQ8N5M4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TTC9CQ8N5M4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9CQ8N5M4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9CQ8N5M4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9CQ8N5M4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TTC9CQ8N5M4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.98■□□□□ 0.79
TTC9CQ8N5M4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TTC9CQ8N5M4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.98■□□□□ 0.79
TTC9CQ8N5M4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.98■□□□□ 0.79
TTC9CQ8N5M4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 BX255925.1-201ENST00000566954 1854 ntBASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TTC9CQ8N5M4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.96■□□□□ 0.79
TTC9CQ8N5M4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC9CQ8N5M4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TTC9CQ8N5M4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC9CQ8N5M4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC9CQ8N5M4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC9CQ8N5M4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC9CQ8N5M4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TTC9CQ8N5M4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC9CQ8N5M4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.94■□□□□ 0.78
TTC9CQ8N5M4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC9CQ8N5M4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TTC9CQ8N5M4 LINC01003-201ENST00000564834 1764 ntBASIC19.93■□□□□ 0.78
TTC9CQ8N5M4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TTC9CQ8N5M4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TTC9CQ8N5M4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TTC9CQ8N5M4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TTC9CQ8N5M4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.92■□□□□ 0.78
TTC9CQ8N5M4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.92■□□□□ 0.78
TTC9CQ8N5M4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TTC9CQ8N5M4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TTC9CQ8N5M4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC9CQ8N5M4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC9CQ8N5M4 AC018358.1-201ENST00000631079 1402 ntBASIC19.91■□□□□ 0.78
TTC9CQ8N5M4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC9CQ8N5M4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.9■□□□□ 0.78
TTC9CQ8N5M4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC9CQ8N5M4 AC110285.7-201ENST00000624417 1536 ntBASIC19.9■□□□□ 0.78
TTC9CQ8N5M4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.9■□□□□ 0.78
TTC9CQ8N5M4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.89■□□□□ 0.77
TTC9CQ8N5M4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC9CQ8N5M4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.89■□□□□ 0.77
TTC9CQ8N5M4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.89■□□□□ 0.77
TTC9CQ8N5M4 LINC01971-201ENST00000617888 1048 ntBASIC19.89■□□□□ 0.77
TTC9CQ8N5M4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC9CQ8N5M4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.88■□□□□ 0.77
TTC9CQ8N5M4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TTC9CQ8N5M4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TTC9CQ8N5M4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC9CQ8N5M4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TTC9CQ8N5M4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TTC9CQ8N5M4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TTC9CQ8N5M4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TTC9CQ8N5M4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TTC9CQ8N5M4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC9CQ8N5M4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC9CQ8N5M4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC9CQ8N5M4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TTC9CQ8N5M4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms