Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAB11FIP4Q86YS3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAB11FIP4Q86YS3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAB11FIP4Q86YS3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAB11FIP4Q86YS3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RAB11FIP4Q86YS3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RAB11FIP4Q86YS3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RAB11FIP4Q86YS3 DUX4L11-201ENST00000611504 1267 ntBASIC29.82■■■□□ 2.36
RAB11FIP4Q86YS3 DUX4L12-201ENST00000614593 1267 ntBASIC29.82■■■□□ 2.36
RAB11FIP4Q86YS3 DUX4L14-201ENST00000621227 1267 ntBASIC29.82■■■□□ 2.36
RAB11FIP4Q86YS3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.82■■■□□ 2.36
RAB11FIP4Q86YS3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
RAB11FIP4Q86YS3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.81■■■□□ 2.36
RAB11FIP4Q86YS3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.81■■■□□ 2.36
RAB11FIP4Q86YS3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 MIR7108-201ENST00000614319 87 ntBASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RAB11FIP4Q86YS3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RAB11FIP4Q86YS3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RAB11FIP4Q86YS3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.79■■■□□ 2.36
RAB11FIP4Q86YS3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAB11FIP4Q86YS3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.78■■■□□ 2.36
RAB11FIP4Q86YS3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.78■■■□□ 2.36
RAB11FIP4Q86YS3 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.78■■■□□ 2.36
RAB11FIP4Q86YS3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAB11FIP4Q86YS3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RAB11FIP4Q86YS3 AC142086.6-201ENST00000621154 1765 ntBASIC29.77■■■□□ 2.36
RAB11FIP4Q86YS3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAB11FIP4Q86YS3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
RAB11FIP4Q86YS3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.36
RAB11FIP4Q86YS3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
RAB11FIP4Q86YS3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RAB11FIP4Q86YS3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.76■■■□□ 2.35
RAB11FIP4Q86YS3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RAB11FIP4Q86YS3 AC110285.7-201ENST00000624417 1536 ntBASIC29.76■■■□□ 2.35
RAB11FIP4Q86YS3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
RAB11FIP4Q86YS3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RAB11FIP4Q86YS3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RAB11FIP4Q86YS3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RAB11FIP4Q86YS3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RAB11FIP4Q86YS3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.73■■■□□ 2.35
RAB11FIP4Q86YS3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.73■■■□□ 2.35
RAB11FIP4Q86YS3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
RAB11FIP4Q86YS3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RAB11FIP4Q86YS3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L13-201ENST00000554103 1267 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L15-201ENST00000611059 1267 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L23-201ENST00000615195 1269 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L24-201ENST00000617576 1269 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L22-201ENST00000618238 1269 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L20-201ENST00000619712 1269 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L21-201ENST00000622058 1269 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L10-201ENST00000622460 1267 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 DUX4L25-201ENST00000624915 1269 ntBASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAB11FIP4Q86YS3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
RAB11FIP4Q86YS3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RAB11FIP4Q86YS3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAB11FIP4Q86YS3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
RAB11FIP4Q86YS3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
RAB11FIP4Q86YS3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RAB11FIP4Q86YS3 AP002414.2-202ENST00000590929 1450 ntBASIC29.68■■■□□ 2.34
RAB11FIP4Q86YS3 CR559946.2-201ENST00000623684 991 ntBASIC29.68■■■□□ 2.34
RAB11FIP4Q86YS3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
RAB11FIP4Q86YS3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAB11FIP4Q86YS3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.67■■■□□ 2.34
RAB11FIP4Q86YS3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.66■■■□□ 2.34
RAB11FIP4Q86YS3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
RAB11FIP4Q86YS3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.66■■■□□ 2.34
RAB11FIP4Q86YS3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RAB11FIP4Q86YS3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.65■■■□□ 2.34
RAB11FIP4Q86YS3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RAB11FIP4Q86YS3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAB11FIP4Q86YS3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RAB11FIP4Q86YS3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RAB11FIP4Q86YS3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAB11FIP4Q86YS3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAB11FIP4Q86YS3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.64■■■□□ 2.34
RAB11FIP4Q86YS3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.64■■■□□ 2.34
RAB11FIP4Q86YS3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.64■■■□□ 2.34
RAB11FIP4Q86YS3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RAB11FIP4Q86YS3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RAB11FIP4Q86YS3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.63■■■□□ 2.33
RAB11FIP4Q86YS3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RAB11FIP4Q86YS3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
RAB11FIP4Q86YS3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.61■■■□□ 2.33
RAB11FIP4Q86YS3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RAB11FIP4Q86YS3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.61■■■□□ 2.33
RAB11FIP4Q86YS3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
RAB11FIP4Q86YS3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
RAB11FIP4Q86YS3 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.6■■■□□ 2.33
RAB11FIP4Q86YS3 MIR3648-2-201ENST00000581792 180 ntBASIC29.6■■■□□ 2.33
RAB11FIP4Q86YS3 MIR3648-1-201ENST00000615959 180 ntBASIC29.6■■■□□ 2.33
RAB11FIP4Q86YS3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RAB11FIP4Q86YS3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RAB11FIP4Q86YS3 AC016575.1-201ENST00000607026 382 ntBASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms