Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRICKLE4Q2TBC4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.8■■□□□ 1.4
PRICKLE4Q2TBC4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRICKLE4Q2TBC4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.79■■□□□ 1.4
PRICKLE4Q2TBC4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRICKLE4Q2TBC4 AP002414.2-202ENST00000590929 1450 ntBASIC23.79■■□□□ 1.4
PRICKLE4Q2TBC4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRICKLE4Q2TBC4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRICKLE4Q2TBC4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRICKLE4Q2TBC4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PRICKLE4Q2TBC4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PRICKLE4Q2TBC4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE4Q2TBC4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L11-201ENST00000611504 1267 ntBASIC23.75■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L12-201ENST00000614593 1267 ntBASIC23.75■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L14-201ENST00000621227 1267 ntBASIC23.75■■□□□ 1.39
PRICKLE4Q2TBC4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.75■■□□□ 1.39
PRICKLE4Q2TBC4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRICKLE4Q2TBC4 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.74■■□□□ 1.39
PRICKLE4Q2TBC4 AC110285.7-201ENST00000624417 1536 ntBASIC23.74■■□□□ 1.39
PRICKLE4Q2TBC4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L13-201ENST00000554103 1267 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L15-201ENST00000611059 1267 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L23-201ENST00000615195 1269 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L24-201ENST00000617576 1269 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L22-201ENST00000618238 1269 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L20-201ENST00000619712 1269 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L21-201ENST00000622058 1269 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L10-201ENST00000622460 1267 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 DUX4L25-201ENST00000624915 1269 ntBASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.72■■□□□ 1.39
PRICKLE4Q2TBC4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PRICKLE4Q2TBC4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.71■■□□□ 1.39
PRICKLE4Q2TBC4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE4Q2TBC4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.7■■□□□ 1.39
PRICKLE4Q2TBC4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.7■■□□□ 1.38
PRICKLE4Q2TBC4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRICKLE4Q2TBC4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE4Q2TBC4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.68■■□□□ 1.38
PRICKLE4Q2TBC4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE4Q2TBC4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PRICKLE4Q2TBC4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE4Q2TBC4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE4Q2TBC4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.68■■□□□ 1.38
PRICKLE4Q2TBC4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.67■■□□□ 1.38
PRICKLE4Q2TBC4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRICKLE4Q2TBC4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PRICKLE4Q2TBC4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PRICKLE4Q2TBC4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.66■■□□□ 1.38
PRICKLE4Q2TBC4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.66■■□□□ 1.38
PRICKLE4Q2TBC4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PRICKLE4Q2TBC4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRICKLE4Q2TBC4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRICKLE4Q2TBC4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRICKLE4Q2TBC4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.64■■□□□ 1.37
PRICKLE4Q2TBC4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRICKLE4Q2TBC4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PRICKLE4Q2TBC4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.63■■□□□ 1.37
PRICKLE4Q2TBC4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.63■■□□□ 1.37
PRICKLE4Q2TBC4 MIR7108-201ENST00000614319 87 ntBASIC23.63■■□□□ 1.37
PRICKLE4Q2TBC4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.63■■□□□ 1.37
PRICKLE4Q2TBC4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRICKLE4Q2TBC4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE4Q2TBC4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE4Q2TBC4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE4Q2TBC4 AC018358.1-201ENST00000631079 1402 ntBASIC23.61■■□□□ 1.37
PRICKLE4Q2TBC4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE4Q2TBC4 LINC01003-201ENST00000564834 1764 ntBASIC23.61■■□□□ 1.37
PRICKLE4Q2TBC4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE4Q2TBC4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.61■■□□□ 1.37
PRICKLE4Q2TBC4 BX255925.1-201ENST00000566954 1854 ntBASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 CR559946.2-201ENST00000623684 991 ntBASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PRICKLE4Q2TBC4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PRICKLE4Q2TBC4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.59■■□□□ 1.37
PRICKLE4Q2TBC4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PRICKLE4Q2TBC4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PRICKLE4Q2TBC4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms