Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 DUX4L29-201ENST00000425409 679 ntBASIC21.95■■□□□ 1.1
SEC61A1P61619 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEC61A1P61619 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SEC61A1P61619 AC021231.2-201ENST00000594613 730 ntBASIC21.94■■□□□ 1.1
SEC61A1P61619 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.93■■□□□ 1.1
SEC61A1P61619 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.93■■□□□ 1.1
SEC61A1P61619 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SEC61A1P61619 ZNRF2P2-203ENST00000454624 420 ntBASIC21.92■■□□□ 1.1
SEC61A1P61619 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SEC61A1P61619 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEC61A1P61619 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEC61A1P61619 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.91■■□□□ 1.1
SEC61A1P61619 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.91■■□□□ 1.1
SEC61A1P61619 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEC61A1P61619 DRD5P2-201ENST00000421395 2012 ntBASIC21.9■■□□□ 1.1
SEC61A1P61619 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEC61A1P61619 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEC61A1P61619 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.9■■□□□ 1.1
SEC61A1P61619 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SEC61A1P61619 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SEC61A1P61619 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.89■■□□□ 1.09
SEC61A1P61619 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SEC61A1P61619 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEC61A1P61619 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEC61A1P61619 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.88■■□□□ 1.09
SEC61A1P61619 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEC61A1P61619 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.87■■□□□ 1.09
SEC61A1P61619 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SEC61A1P61619 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SEC61A1P61619 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.87■■□□□ 1.09
SEC61A1P61619 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.87■■□□□ 1.09
SEC61A1P61619 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SEC61A1P61619 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
SEC61A1P61619 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SEC61A1P61619 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A1P61619 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A1P61619 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.85■■□□□ 1.09
SEC61A1P61619 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.85■■□□□ 1.09
SEC61A1P61619 AL139393.2-201ENST00000608721 2025 ntBASIC21.85■■□□□ 1.09
SEC61A1P61619 AC010864.1-201ENST00000609407 1511 ntBASIC21.85■■□□□ 1.09
SEC61A1P61619 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A1P61619 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A1P61619 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A1P61619 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SEC61A1P61619 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SEC61A1P61619 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SEC61A1P61619 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A1P61619 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SEC61A1P61619 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.82■■□□□ 1.08
SEC61A1P61619 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A1P61619 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
SEC61A1P61619 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A1P61619 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A1P61619 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A1P61619 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.81■■□□□ 1.08
SEC61A1P61619 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SEC61A1P61619 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A1P61619 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A1P61619 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A1P61619 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.8■■□□□ 1.08
SEC61A1P61619 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A1P61619 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A1P61619 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A1P61619 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A1P61619 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A1P61619 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A1P61619 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A1P61619 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A1P61619 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.78■■□□□ 1.08
SEC61A1P61619 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A1P61619 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A1P61619 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.78■■□□□ 1.08
SEC61A1P61619 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEC61A1P61619 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEC61A1P61619 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SEC61A1P61619 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEC61A1P61619 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEC61A1P61619 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEC61A1P61619 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEC61A1P61619 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEC61A1P61619 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A1P61619 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A1P61619 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEC61A1P61619 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.72■■□□□ 1.07
SEC61A1P61619 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.72■■□□□ 1.07
SEC61A1P61619 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEC61A1P61619 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SEC61A1P61619 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.72■■□□□ 1.07
SEC61A1P61619 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEC61A1P61619 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.72■■□□□ 1.07
SEC61A1P61619 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEC61A1P61619 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SEC61A1P61619 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SEC61A1P61619 AL449106.1-201ENST00000608517 1980 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms