Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PDE1AP54750 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PDE1AP54750 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDE1AP54750 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDE1AP54750 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDE1AP54750 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PDE1AP54750 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
PDE1AP54750 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PDE1AP54750 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PDE1AP54750 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE1AP54750 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PDE1AP54750 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE1AP54750 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.18■■■□□ 2.58
PDE1AP54750 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.18■■■□□ 2.58
PDE1AP54750 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.18■■■□□ 2.58
PDE1AP54750 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PDE1AP54750 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDE1AP54750 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PDE1AP54750 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
PDE1AP54750 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
PDE1AP54750 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
PDE1AP54750 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.17■■■□□ 2.58
PDE1AP54750 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.15■■■□□ 2.58
PDE1AP54750 BX255925.1-201ENST00000566954 1854 ntBASIC31.15■■■□□ 2.58
PDE1AP54750 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.15■■■□□ 2.58
PDE1AP54750 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.15■■■□□ 2.58
PDE1AP54750 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PDE1AP54750 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.14■■■□□ 2.58
PDE1AP54750 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.13■■■□□ 2.57
PDE1AP54750 LINC01003-201ENST00000564834 1764 ntBASIC31.13■■■□□ 2.57
PDE1AP54750 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PDE1AP54750 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PDE1AP54750 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDE1AP54750 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
PDE1AP54750 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDE1AP54750 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDE1AP54750 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDE1AP54750 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PDE1AP54750 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.11■■■□□ 2.57
PDE1AP54750 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PDE1AP54750 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
PDE1AP54750 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PDE1AP54750 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PDE1AP54750 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PDE1AP54750 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
PDE1AP54750 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDE1AP54750 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.07■■■□□ 2.56
PDE1AP54750 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDE1AP54750 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PDE1AP54750 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PDE1AP54750 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
PDE1AP54750 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PDE1AP54750 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
PDE1AP54750 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PDE1AP54750 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.04■■■□□ 2.56
PDE1AP54750 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
PDE1AP54750 AC110285.7-201ENST00000624417 1536 ntBASIC31.03■■■□□ 2.56
PDE1AP54750 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDE1AP54750 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.03■■■□□ 2.56
PDE1AP54750 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
PDE1AP54750 AC018358.1-201ENST00000631079 1402 ntBASIC31.02■■■□□ 2.56
PDE1AP54750 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDE1AP54750 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.02■■■□□ 2.56
PDE1AP54750 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.02■■■□□ 2.56
PDE1AP54750 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDE1AP54750 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDE1AP54750 LINC01971-201ENST00000617888 1048 ntBASIC31.01■■■□□ 2.55
PDE1AP54750 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDE1AP54750 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31■■■□□ 2.55
PDE1AP54750 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PDE1AP54750 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
PDE1AP54750 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PDE1AP54750 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.98■■■□□ 2.55
PDE1AP54750 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
PDE1AP54750 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
PDE1AP54750 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDE1AP54750 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDE1AP54750 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.97■■■□□ 2.55
PDE1AP54750 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDE1AP54750 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDE1AP54750 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PDE1AP54750 ZNRF2P2-203ENST00000454624 420 ntBASIC30.96■■■□□ 2.55
PDE1AP54750 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.96■■■□□ 2.55
PDE1AP54750 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PDE1AP54750 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
PDE1AP54750 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDE1AP54750 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDE1AP54750 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.94■■■□□ 2.54
PDE1AP54750 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDE1AP54750 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.93■■■□□ 2.54
PDE1AP54750 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
PDE1AP54750 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.92■■■□□ 2.54
PDE1AP54750 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.92■■■□□ 2.54
PDE1AP54750 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
PDE1AP54750 AL121749.1-202ENST00000609313 2153 ntBASIC30.92■■■□□ 2.54
PDE1AP54750 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.92■■■□□ 2.54
PDE1AP54750 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDE1AP54750 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.91■■■□□ 2.54
PDE1AP54750 ABHD17AP4-201ENST00000411545 909 ntBASIC30.9■■■□□ 2.54
PDE1AP54750 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms