Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP13P45452 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.29■■□□□ 1.8
MMP13P45452 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MMP13P45452 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.29■■□□□ 1.8
MMP13P45452 AP004833.2-201ENST00000532228 1454 ntBASIC26.29■■□□□ 1.8
MMP13P45452 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP13P45452 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP13P45452 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP13P45452 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
MMP13P45452 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.28■■□□□ 1.8
MMP13P45452 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 LINC00273-201ENST00000539813 1452 ntBASIC26.27■■□□□ 1.8
MMP13P45452 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.26■■□□□ 1.79
MMP13P45452 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.26■■□□□ 1.79
MMP13P45452 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
MMP13P45452 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.26■■□□□ 1.79
MMP13P45452 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.26■■□□□ 1.79
MMP13P45452 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.26■■□□□ 1.79
MMP13P45452 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
MMP13P45452 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP13P45452 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP13P45452 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
MMP13P45452 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
MMP13P45452 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.24■■□□□ 1.79
MMP13P45452 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.24■■□□□ 1.79
MMP13P45452 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.24■■□□□ 1.79
MMP13P45452 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP13P45452 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP13P45452 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MMP13P45452 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
MMP13P45452 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
MMP13P45452 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
MMP13P45452 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP13P45452 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP13P45452 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP13P45452 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MMP13P45452 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
MMP13P45452 AC135983.2-203ENST00000454486 1613 ntBASIC26.21■■□□□ 1.79
MMP13P45452 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP13P45452 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP13P45452 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP13P45452 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
MMP13P45452 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
MMP13P45452 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
MMP13P45452 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MMP13P45452 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
MMP13P45452 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.19■■□□□ 1.78
MMP13P45452 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
MMP13P45452 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MMP13P45452 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.19■■□□□ 1.78
MMP13P45452 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
MMP13P45452 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
MMP13P45452 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.18■■□□□ 1.78
MMP13P45452 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.18■■□□□ 1.78
MMP13P45452 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MMP13P45452 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
MMP13P45452 WHAMMP2-203ENST00000563942 1603 ntBASIC26.17■■□□□ 1.78
MMP13P45452 BX255925.1-201ENST00000566954 1854 ntBASIC26.17■■□□□ 1.78
MMP13P45452 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
MMP13P45452 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
MMP13P45452 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
MMP13P45452 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
MMP13P45452 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.16■■□□□ 1.78
MMP13P45452 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
MMP13P45452 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
MMP13P45452 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
MMP13P45452 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
MMP13P45452 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
MMP13P45452 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.12■■□□□ 1.77
MMP13P45452 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.12■■□□□ 1.77
MMP13P45452 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP13P45452 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.12■■□□□ 1.77
MMP13P45452 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP13P45452 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.12■■□□□ 1.77
MMP13P45452 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP13P45452 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MMP13P45452 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MMP13P45452 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.1■■□□□ 1.77
MMP13P45452 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms