Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT20P35900 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT20P35900 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.86■■□□□ 1.41
KRT20P35900 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT20P35900 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.86■■□□□ 1.41
KRT20P35900 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT20P35900 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.85■■□□□ 1.41
KRT20P35900 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT20P35900 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT20P35900 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
KRT20P35900 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT20P35900 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT20P35900 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.83■■□□□ 1.41
KRT20P35900 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
KRT20P35900 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT20P35900 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT20P35900 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT20P35900 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
KRT20P35900 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
KRT20P35900 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
KRT20P35900 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
KRT20P35900 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT20P35900 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT20P35900 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT20P35900 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.81■■□□□ 1.4
KRT20P35900 AP004833.2-201ENST00000532228 1454 ntBASIC23.81■■□□□ 1.4
KRT20P35900 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT20P35900 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
KRT20P35900 LINC00273-201ENST00000539813 1452 ntBASIC23.8■■□□□ 1.4
KRT20P35900 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT20P35900 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
KRT20P35900 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
KRT20P35900 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT20P35900 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT20P35900 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT20P35900 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.79■■□□□ 1.4
KRT20P35900 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT20P35900 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.79■■□□□ 1.4
KRT20P35900 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.79■■□□□ 1.4
KRT20P35900 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT20P35900 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT20P35900 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT20P35900 AC135731.1-201ENST00000569415 2548 ntBASIC23.78■■□□□ 1.4
KRT20P35900 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT20P35900 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT20P35900 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT20P35900 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT20P35900 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT20P35900 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.76■■□□□ 1.39
KRT20P35900 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT20P35900 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
KRT20P35900 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT20P35900 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.75■■□□□ 1.39
KRT20P35900 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT20P35900 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.74■■□□□ 1.39
KRT20P35900 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
KRT20P35900 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT20P35900 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT20P35900 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
KRT20P35900 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT20P35900 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRT20P35900 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
KRT20P35900 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRT20P35900 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
KRT20P35900 AC135983.2-203ENST00000454486 1613 ntBASIC23.71■■□□□ 1.39
KRT20P35900 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT20P35900 ABHD17AP4-201ENST00000411545 909 ntBASIC23.71■■□□□ 1.39
KRT20P35900 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT20P35900 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KRT20P35900 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.7■■□□□ 1.38
KRT20P35900 ZNRF2P2-203ENST00000454624 420 ntBASIC23.7■■□□□ 1.38
KRT20P35900 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT20P35900 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT20P35900 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
KRT20P35900 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT20P35900 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT20P35900 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT20P35900 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT20P35900 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT20P35900 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT20P35900 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.68■■□□□ 1.38
KRT20P35900 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.68■■□□□ 1.38
KRT20P35900 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT20P35900 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT20P35900 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT20P35900 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.67■■□□□ 1.38
KRT20P35900 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
KRT20P35900 WHAMMP2-203ENST00000563942 1603 ntBASIC23.67■■□□□ 1.38
KRT20P35900 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.67■■□□□ 1.38
KRT20P35900 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT20P35900 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.67■■□□□ 1.38
KRT20P35900 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms