Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PSMC3P17980 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.52■■□□□ 1.84
PSMC3P17980 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PSMC3P17980 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
PSMC3P17980 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PSMC3P17980 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PSMC3P17980 AC012354.3-201ENST00000623734 483 ntBASIC26.5■■□□□ 1.83
PSMC3P17980 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PSMC3P17980 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
PSMC3P17980 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PSMC3P17980 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PSMC3P17980 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PSMC3P17980 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
PSMC3P17980 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PSMC3P17980 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PSMC3P17980 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.47■■□□□ 1.83
PSMC3P17980 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PSMC3P17980 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PSMC3P17980 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.47■■□□□ 1.83
PSMC3P17980 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PSMC3P17980 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PSMC3P17980 AC060814.1-201ENST00000554326 538 ntBASIC26.46■■□□□ 1.83
PSMC3P17980 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PSMC3P17980 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.45■■□□□ 1.82
PSMC3P17980 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
PSMC3P17980 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PSMC3P17980 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PSMC3P17980 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PSMC3P17980 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PSMC3P17980 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PSMC3P17980 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PSMC3P17980 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.42■■□□□ 1.82
PSMC3P17980 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
PSMC3P17980 MIR219A2-201ENST00000608502 1504 ntBASIC26.41■■□□□ 1.82
PSMC3P17980 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.41■■□□□ 1.82
PSMC3P17980 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSMC3P17980 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSMC3P17980 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSMC3P17980 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.4■■□□□ 1.82
PSMC3P17980 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSMC3P17980 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSMC3P17980 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
PSMC3P17980 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PSMC3P17980 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PSMC3P17980 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.39■■□□□ 1.82
PSMC3P17980 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PSMC3P17980 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.39■■□□□ 1.81
PSMC3P17980 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.38■■□□□ 1.81
PSMC3P17980 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.38■■□□□ 1.81
PSMC3P17980 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PSMC3P17980 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.38■■□□□ 1.81
PSMC3P17980 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PSMC3P17980 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.37■■□□□ 1.81
PSMC3P17980 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PSMC3P17980 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PSMC3P17980 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PSMC3P17980 U85056.1-201ENST00000616429 682 ntBASIC26.36■■□□□ 1.81
PSMC3P17980 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PSMC3P17980 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PSMC3P17980 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.35■■□□□ 1.81
PSMC3P17980 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PSMC3P17980 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
PSMC3P17980 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PSMC3P17980 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.33■■□□□ 1.8
PSMC3P17980 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.32■■□□□ 1.8
PSMC3P17980 AC092296.2-201ENST00000589470 999 ntBASIC26.32■■□□□ 1.8
PSMC3P17980 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PSMC3P17980 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PSMC3P17980 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PSMC3P17980 AC018358.1-201ENST00000631079 1402 ntBASIC26.31■■□□□ 1.8
PSMC3P17980 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PSMC3P17980 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PSMC3P17980 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PSMC3P17980 AL033527.3-201ENST00000566366 1196 ntBASIC26.31■■□□□ 1.8
PSMC3P17980 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
PSMC3P17980 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PSMC3P17980 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PSMC3P17980 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
PSMC3P17980 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.3■■□□□ 1.8
PSMC3P17980 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PSMC3P17980 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PSMC3P17980 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
PSMC3P17980 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PSMC3P17980 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PSMC3P17980 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.28■■□□□ 1.8
PSMC3P17980 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PSMC3P17980 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PSMC3P17980 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.28■■□□□ 1.8
PSMC3P17980 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PSMC3P17980 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PSMC3P17980 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PSMC3P17980 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PSMC3P17980 ECEL1P2-201ENST00000461596 1295 ntBASIC26.27■■□□□ 1.8
PSMC3P17980 AC126177.7-201ENST00000547904 679 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms