Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.06■□□□□ 0.8
IFNA1P01562 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNA1P01562 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFNA1P01562 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFNA1P01562 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFNA1P01562 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
IFNA1P01562 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
IFNA1P01562 AC091060.1-201ENST00000623524 1766 ntBASIC20.04■□□□□ 0.8
IFNA1P01562 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.04■□□□□ 0.8
IFNA1P01562 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
IFNA1P01562 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.03■□□□□ 0.8
IFNA1P01562 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFNA1P01562 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNA1P01562 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNA1P01562 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNA1P01562 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
IFNA1P01562 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNA1P01562 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFNA1P01562 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IFNA1P01562 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.02■□□□□ 0.79
IFNA1P01562 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFNA1P01562 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNA1P01562 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.01■□□□□ 0.79
IFNA1P01562 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFNA1P01562 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFNA1P01562 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFNA1P01562 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFNA1P01562 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
IFNA1P01562 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IFNA1P01562 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFNA1P01562 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
IFNA1P01562 AP004833.2-201ENST00000532228 1454 ntBASIC19.99■□□□□ 0.79
IFNA1P01562 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.98■□□□□ 0.79
IFNA1P01562 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IFNA1P01562 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
IFNA1P01562 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IFNA1P01562 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IFNA1P01562 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
IFNA1P01562 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
IFNA1P01562 AC020928.2-201ENST00000588717 2197 ntBASIC19.97■□□□□ 0.79
IFNA1P01562 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
IFNA1P01562 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.97■□□□□ 0.79
IFNA1P01562 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IFNA1P01562 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
IFNA1P01562 AC145676.1-201ENST00000514988 2004 ntBASIC19.97■□□□□ 0.79
IFNA1P01562 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
IFNA1P01562 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
IFNA1P01562 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFNA1P01562 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFNA1P01562 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IFNA1P01562 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFNA1P01562 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
IFNA1P01562 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFNA1P01562 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFNA1P01562 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.94■□□□□ 0.78
IFNA1P01562 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFNA1P01562 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFNA1P01562 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFNA1P01562 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFNA1P01562 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFNA1P01562 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFNA1P01562 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IFNA1P01562 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IFNA1P01562 AC010864.1-201ENST00000609407 1511 ntBASIC19.92■□□□□ 0.78
IFNA1P01562 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
IFNA1P01562 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IFNA1P01562 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IFNA1P01562 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.92■□□□□ 0.78
IFNA1P01562 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
IFNA1P01562 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IFNA1P01562 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFNA1P01562 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
IFNA1P01562 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 AC093323.1-202ENST00000635031 2045 ntBASIC19.9■□□□□ 0.78
IFNA1P01562 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.9■□□□□ 0.78
IFNA1P01562 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
IFNA1P01562 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFNA1P01562 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
IFNA1P01562 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IFNA1P01562 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.89■□□□□ 0.77
IFNA1P01562 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
IFNA1P01562 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.89■□□□□ 0.77
IFNA1P01562 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.88■□□□□ 0.77
IFNA1P01562 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.88■□□□□ 0.77
IFNA1P01562 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.88■□□□□ 0.77
IFNA1P01562 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms