Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DHFRP00374 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.81■■□□□ 1.08
DHFRP00374 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DHFRP00374 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
DHFRP00374 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
DHFRP00374 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.8■■□□□ 1.08
DHFRP00374 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DHFRP00374 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DHFRP00374 LINC01003-201ENST00000564834 1764 ntBASIC21.79■■□□□ 1.08
DHFRP00374 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHFRP00374 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DHFRP00374 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHFRP00374 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DHFRP00374 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.79■■□□□ 1.08
DHFRP00374 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.78■■□□□ 1.08
DHFRP00374 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHFRP00374 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHFRP00374 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHFRP00374 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.78■■□□□ 1.08
DHFRP00374 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHFRP00374 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHFRP00374 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHFRP00374 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DHFRP00374 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DHFRP00374 AL031258.1-201ENST00000623562 325 ntBASIC21.77■■□□□ 1.08
DHFRP00374 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHFRP00374 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHFRP00374 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHFRP00374 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.76■■□□□ 1.07
DHFRP00374 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHFRP00374 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DHFRP00374 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DHFRP00374 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHFRP00374 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.74■■□□□ 1.07
DHFRP00374 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHFRP00374 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DHFRP00374 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHFRP00374 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.73■■□□□ 1.07
DHFRP00374 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.73■■□□□ 1.07
DHFRP00374 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHFRP00374 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHFRP00374 AC145676.1-201ENST00000514988 2004 ntBASIC21.73■■□□□ 1.07
DHFRP00374 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
DHFRP00374 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHFRP00374 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHFRP00374 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.73■■□□□ 1.07
DHFRP00374 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHFRP00374 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.72■■□□□ 1.07
DHFRP00374 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DHFRP00374 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHFRP00374 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHFRP00374 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
DHFRP00374 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.7■■□□□ 1.06
DHFRP00374 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHFRP00374 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHFRP00374 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHFRP00374 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHFRP00374 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHFRP00374 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.69■■□□□ 1.06
DHFRP00374 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DHFRP00374 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.69■■□□□ 1.06
DHFRP00374 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHFRP00374 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHFRP00374 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.69■■□□□ 1.06
DHFRP00374 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.68■■□□□ 1.06
DHFRP00374 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DHFRP00374 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DHFRP00374 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DHFRP00374 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DHFRP00374 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DHFRP00374 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
DHFRP00374 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
DHFRP00374 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
DHFRP00374 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DHFRP00374 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DHFRP00374 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DHFRP00374 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.67■■□□□ 1.06
DHFRP00374 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
DHFRP00374 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DHFRP00374 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DHFRP00374 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DHFRP00374 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DHFRP00374 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DHFRP00374 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DHFRP00374 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
DHFRP00374 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DHFRP00374 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DHFRP00374 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DHFRP00374 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DHFRP00374 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.64■■□□□ 1.05
DHFRP00374 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHFRP00374 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHFRP00374 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHFRP00374 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHFRP00374 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DHFRP00374 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DHFRP00374 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHFRP00374 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHFRP00374 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DHFRP00374 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms