Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.78■■□□□ 1.24
KRT33AO76009 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KRT33AO76009 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KRT33AO76009 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.77■■□□□ 1.24
KRT33AO76009 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
KRT33AO76009 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.77■■□□□ 1.24
KRT33AO76009 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KRT33AO76009 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
KRT33AO76009 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT33AO76009 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.75■■□□□ 1.23
KRT33AO76009 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KRT33AO76009 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
KRT33AO76009 AP004833.2-201ENST00000532228 1454 ntBASIC22.74■■□□□ 1.23
KRT33AO76009 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.74■■□□□ 1.23
KRT33AO76009 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.74■■□□□ 1.23
KRT33AO76009 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.72■■□□□ 1.23
KRT33AO76009 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
KRT33AO76009 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRT33AO76009 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRT33AO76009 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.72■■□□□ 1.23
KRT33AO76009 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRT33AO76009 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRT33AO76009 AC135983.2-203ENST00000454486 1613 ntBASIC22.71■■□□□ 1.23
KRT33AO76009 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
KRT33AO76009 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
KRT33AO76009 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
KRT33AO76009 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.71■■□□□ 1.23
KRT33AO76009 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.71■■□□□ 1.23
KRT33AO76009 LINC01971-201ENST00000617888 1048 ntBASIC22.71■■□□□ 1.23
KRT33AO76009 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
KRT33AO76009 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
KRT33AO76009 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
KRT33AO76009 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
KRT33AO76009 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
KRT33AO76009 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
KRT33AO76009 MIR7108-201ENST00000614319 87 ntBASIC22.69■■□□□ 1.22
KRT33AO76009 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRT33AO76009 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRT33AO76009 WHAMMP2-203ENST00000563942 1603 ntBASIC22.68■■□□□ 1.22
KRT33AO76009 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRT33AO76009 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.68■■□□□ 1.22
KRT33AO76009 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KRT33AO76009 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.68■■□□□ 1.22
KRT33AO76009 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
KRT33AO76009 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT33AO76009 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.67■■□□□ 1.22
KRT33AO76009 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT33AO76009 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT33AO76009 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT33AO76009 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.67■■□□□ 1.22
KRT33AO76009 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
KRT33AO76009 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT33AO76009 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
KRT33AO76009 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT33AO76009 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT33AO76009 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.65■■□□□ 1.22
KRT33AO76009 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT33AO76009 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT33AO76009 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT33AO76009 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.65■■□□□ 1.22
KRT33AO76009 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT33AO76009 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT33AO76009 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.64■■□□□ 1.21
KRT33AO76009 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT33AO76009 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT33AO76009 AL121749.1-202ENST00000609313 2153 ntBASIC22.64■■□□□ 1.21
KRT33AO76009 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT33AO76009 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT33AO76009 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KRT33AO76009 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT33AO76009 DUX4L11-201ENST00000611504 1267 ntBASIC22.63■■□□□ 1.21
KRT33AO76009 DUX4L12-201ENST00000614593 1267 ntBASIC22.63■■□□□ 1.21
KRT33AO76009 DUX4L14-201ENST00000621227 1267 ntBASIC22.63■■□□□ 1.21
KRT33AO76009 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.63■■□□□ 1.21
KRT33AO76009 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KRT33AO76009 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
KRT33AO76009 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.62■■□□□ 1.21
KRT33AO76009 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT33AO76009 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT33AO76009 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT33AO76009 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.61■■□□□ 1.21
KRT33AO76009 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.61■■□□□ 1.21
KRT33AO76009 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT33AO76009 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
KRT33AO76009 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT33AO76009 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.6■■□□□ 1.21
KRT33AO76009 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT33AO76009 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
KRT33AO76009 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRT33AO76009 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT33AO76009 AC100797.4-201ENST00000631653 1827 ntBASIC22.59■■□□□ 1.21
KRT33AO76009 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KRT33AO76009 DRD5P2-201ENST00000421395 2012 ntBASIC22.59■■□□□ 1.21
KRT33AO76009 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.59■■□□□ 1.21
KRT33AO76009 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT33AO76009 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
KRT33AO76009 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT33AO76009 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
KRT33AO76009 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT33AO76009 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms