Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SUPT3HO75486 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SUPT3HO75486 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SUPT3HO75486 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SUPT3HO75486 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.96■■□□□ 1.59
SUPT3HO75486 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SUPT3HO75486 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SUPT3HO75486 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
SUPT3HO75486 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.96■■□□□ 1.59
SUPT3HO75486 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SUPT3HO75486 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SUPT3HO75486 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SUPT3HO75486 WHAMMP2-203ENST00000563942 1603 ntBASIC24.95■■□□□ 1.58
SUPT3HO75486 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SUPT3HO75486 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SUPT3HO75486 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SUPT3HO75486 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SUPT3HO75486 LINC01003-201ENST00000564834 1764 ntBASIC24.95■■□□□ 1.58
SUPT3HO75486 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SUPT3HO75486 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SUPT3HO75486 AL121749.1-202ENST00000609313 2153 ntBASIC24.94■■□□□ 1.58
SUPT3HO75486 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
SUPT3HO75486 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.94■■□□□ 1.58
SUPT3HO75486 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SUPT3HO75486 AP002414.2-202ENST00000590929 1450 ntBASIC24.93■■□□□ 1.58
SUPT3HO75486 LINC00273-201ENST00000539813 1452 ntBASIC24.92■■□□□ 1.58
SUPT3HO75486 AC087741.3-201ENST00000624270 1347 ntBASIC24.91■■□□□ 1.58
SUPT3HO75486 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SUPT3HO75486 AL162393.1-201ENST00000437852 946 ntBASIC24.91■■□□□ 1.58
SUPT3HO75486 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.91■■□□□ 1.58
SUPT3HO75486 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.91■■□□□ 1.58
SUPT3HO75486 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
SUPT3HO75486 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SUPT3HO75486 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.9■■□□□ 1.58
SUPT3HO75486 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SUPT3HO75486 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.9■■□□□ 1.58
SUPT3HO75486 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SUPT3HO75486 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SUPT3HO75486 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.89■■□□□ 1.58
SUPT3HO75486 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
SUPT3HO75486 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SUPT3HO75486 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SUPT3HO75486 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SUPT3HO75486 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SUPT3HO75486 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.88■■□□□ 1.57
SUPT3HO75486 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SUPT3HO75486 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SUPT3HO75486 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SUPT3HO75486 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SUPT3HO75486 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.85■■□□□ 1.57
SUPT3HO75486 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.85■■□□□ 1.57
SUPT3HO75486 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SUPT3HO75486 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SUPT3HO75486 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SUPT3HO75486 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SUPT3HO75486 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SUPT3HO75486 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SUPT3HO75486 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SUPT3HO75486 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.84■■□□□ 1.57
SUPT3HO75486 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SUPT3HO75486 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SUPT3HO75486 AC044849.2-201ENST00000606596 710 ntBASIC24.83■■□□□ 1.57
SUPT3HO75486 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SUPT3HO75486 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SUPT3HO75486 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.83■■□□□ 1.56
SUPT3HO75486 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.83■■□□□ 1.56
SUPT3HO75486 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
SUPT3HO75486 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SUPT3HO75486 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
SUPT3HO75486 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SUPT3HO75486 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SUPT3HO75486 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SUPT3HO75486 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.81■■□□□ 1.56
SUPT3HO75486 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SUPT3HO75486 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.8■■□□□ 1.56
SUPT3HO75486 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SUPT3HO75486 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.8■■□□□ 1.56
SUPT3HO75486 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SUPT3HO75486 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SUPT3HO75486 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.79■■□□□ 1.56
SUPT3HO75486 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SUPT3HO75486 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.78■■□□□ 1.56
SUPT3HO75486 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
SUPT3HO75486 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SUPT3HO75486 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SUPT3HO75486 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SUPT3HO75486 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SUPT3HO75486 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SUPT3HO75486 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
SUPT3HO75486 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
SUPT3HO75486 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SUPT3HO75486 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SUPT3HO75486 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SUPT3HO75486 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms